RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 GRM4Q14833 912 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 NECTIN1Q15223 517 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 HS1BP3Q53T59 392 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 AP5M1Q9H0R1 490 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 IL25Q9H293 177 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 Q9Y3F1 56 aa12.32□□□□□ -0.44
TCF4-206ENST00000537856 ZNF865P0CJ78 1059 aaPredicted RBP12.31□□□□□ -0.44
TCF4-206ENST00000537856 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 COL6A1P12109 1028 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 PSMA5P28066 241 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 PDE4DQ08499 809 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 TSGA10IPQ3SY00 556 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 MB21D2Q8IYB1 491 aaPredicted RBP12.31□□□□□ -0.44
TCF4-206ENST00000537856 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
TCF4-206ENST00000537856 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
TCF4-206ENST00000537856 UBA5Q9GZZ9 404 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
TCF4-206ENST00000537856 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
TCF4-206ENST00000537856 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 ZBTB5O15062 677 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
TCF4-206ENST00000537856 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 VAT1LQ9HCJ6 419 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 CABYRO75952 493 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 SNAI1O95863 264 aaPredicted RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 CALML3P27482 149 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 SNAP25P60880 206 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 LRRC41Q15345 812 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 USH1GQ495M9 461 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 MUM1L1Q5H9M0 696 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 TEX2Q8IWB9 1127 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
TCF4-206ENST00000537856 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
TCF4-206ENST00000537856 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 QRICH1Q2TAL8 776 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 DHX32Q7L7V1 743 aaKnown RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 JMJD4Q9H9V9 463 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 MAD2L2Q9UI95 211 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 ZNFX1Q9P2E3 1918 aaKnown RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 H0YGN5 161 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 CNTN2Q02246 1040 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 ZNF654Q8IZM8 581 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 DIS3LQ8TF46 1054 aaKnown RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 CUL5Q93034 780 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 GLT1D1Q96MS3 346 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 LBHD1Q9BQE6 289 aaPredicted RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
TCF4-206ENST00000537856 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
TCF4-206ENST00000537856 CCDC196A0A1B0GTZ2 297 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 KPNA6O60684 536 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
TCF4-206ENST00000537856 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
TCF4-206ENST00000537856 RCAN1P53805 252 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 GJA9P57773 515 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 RPS6P62753 249 aaKnown RBP12.28□□□□□ -0.44
TCF4-206ENST00000537856 TROAPQ12815 778 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
TCF4-206ENST00000537856 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 CLEC4DQ8WXI8 215 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 CCDC94Q9BW85 323 aaPredicted RBP12.28□□□□□ -0.44
TCF4-206ENST00000537856 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 FAM13BQ9NYF5 915 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 ELP1O95163 1332 aa12.28□□□□□ -0.44
TCF4-206ENST00000537856 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 NFIBO00712 420 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.44
TCF4-206ENST00000537856 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.44
TCF4-206ENST00000537856 STXBP2Q15833 593 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 SLC39A5Q6ZMH5 540 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 SCFD2Q8WU76 684 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.44
TCF4-206ENST00000537856 MTMR8Q96EF0 704 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms