RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
COMMD9-208ENST00000533643 FCER1AP12319 257 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 PTPREP23469 700 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 DDIT3P35638 169 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 RPS6P62753 249 aaKnown RBP13.67□□□□□ -0.22
COMMD9-208ENST00000533643 CAP1Q01518 475 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 GPR142Q7Z601 462 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 BLIDQ8IZY5 108 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 BICD2Q8TD16 824 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 MMP19Q99542 508 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 ARHGAP39Q9C0H5 1083 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 CYP39A1Q9NYL5 469 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
COMMD9-208ENST00000533643 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
COMMD9-208ENST00000533643 PFASO15067 1338 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 SLC15A5A6NIM6 579 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 STX6O43752 255 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 STRNO43815 780 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 FKTNO75072 461 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 KRT2P35908 639 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 PSMC4P43686 418 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 GRB14Q14449 540 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 KCTD2Q14681 263 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 MORN1Q5T089 497 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 MAP3K20Q9NYL2 800 aaKnown RBP13.66□□□□□ -0.22
COMMD9-208ENST00000533643 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 IVNS1ABPQ9Y6Y0 642 aa13.66□□□□□ -0.22
COMMD9-208ENST00000533643 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 TNPO2O14787 897 aaKnown RBP13.65□□□□□ -0.22
COMMD9-208ENST00000533643 PGK2P07205 417 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 ADORA2AP29274 412 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 FCGRTP55899 365 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 CNTN2Q02246 1040 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 NR5A1Q13285 461 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 PKP1Q13835 747 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 FAM133AQ8N9E0 248 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 ZNF296Q8WUU4 475 aaPredicted RBP13.65□□□□□ -0.22
COMMD9-208ENST00000533643 USP6NLQ92738 828 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
COMMD9-208ENST00000533643 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
COMMD9-208ENST00000533643 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 COBLO75128 1261 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 FOSP01100 380 aaPredicted RBP13.64□□□□□ -0.23
COMMD9-208ENST00000533643 PDIA4P13667 645 aaKnown RBP13.64□□□□□ -0.23
COMMD9-208ENST00000533643 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.23
COMMD9-208ENST00000533643 KIF22Q14807 665 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 MCTP1Q6DN14 999 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 PGBD1Q96JS3 809 aa13.64□□□□□ -0.23
COMMD9-208ENST00000533643 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
COMMD9-208ENST00000533643 SOWAHBA6NEL2 793 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 ZNF792Q3KQV3 632 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
COMMD9-208ENST00000533643 MCTP2Q6DN12 878 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 KRT25Q7Z3Z0 450 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 FGD4Q96M96 766 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 ASTN1O14525 1302 aa13.63□□□□□ -0.23
COMMD9-208ENST00000533643 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 FOXN1O15353 648 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 BRD1O95696 1058 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
COMMD9-208ENST00000533643 RESTQ13127 1097 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
COMMD9-208ENST00000533643 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
COMMD9-208ENST00000533643 PIK3AP1Q6ZUJ8 805 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 DPP9Q86TI2 863 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
COMMD9-208ENST00000533643 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms