RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 TNKSO95271 1327 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 B4DLN1 442 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 MYL3P08590 195 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CMTM1-216ENST00000533078 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 SCLYQ96I15 445 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 WNT8AQ9H1J5 351 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
CMTM1-216ENST00000533078 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
CMTM1-216ENST00000533078 KPNA6O60684 536 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 ICAM1P05362 532 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 TAPT1Q6NXT6 567 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 OR6J1Q8NGC5 347 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
CMTM1-216ENST00000533078 FTOQ9C0B1 505 aaKnown RBP eCLIP13.65□□□□□ -0.22
CMTM1-216ENST00000533078 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
CMTM1-216ENST00000533078 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CMTM1-216ENST00000533078 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
CMTM1-216ENST00000533078 CYP2C9P11712 490 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 PLA2G5P39877 138 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 SNAP25P60880 206 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 PDE4DQ08499 809 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 BFSP2Q13515 415 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 PPP2R5BQ15173 497 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
CMTM1-216ENST00000533078 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
CMTM1-216ENST00000533078 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 CA3P07451 260 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 MYOGP15173 224 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 KCNJ6P48051 423 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
CMTM1-216ENST00000533078 PURAQ00577 322 aaKnown RBP13.63□□□□□ -0.23
CMTM1-216ENST00000533078 BAATQ14032 418 aaPredicted RBP13.63□□□□□ -0.23
CMTM1-216ENST00000533078 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
CMTM1-216ENST00000533078 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
CMTM1-216ENST00000533078 CALML3P27482 149 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 TFF2Q03403 129 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
CMTM1-216ENST00000533078 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
CMTM1-216ENST00000533078 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
CMTM1-216ENST00000533078 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
CMTM1-216ENST00000533078 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 BMP1P13497 986 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
CMTM1-216ENST00000533078 PTGS1P23219 599 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 RNF207Q6ZRF8 634 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
CMTM1-216ENST00000533078 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
CMTM1-216ENST00000533078 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
CMTM1-216ENST00000533078 PRRC2BQ5JSZ5 2229 aaKnown RBP13.61□□□□□ -0.23
CMTM1-216ENST00000533078 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
CMTM1-216ENST00000533078 NFIBO00712 420 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 TLL1O43897 1013 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 IQCF3P0C7M6 154 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 TOP1P11387 765 aaKnown RBP13.6□□□□□ -0.23
CMTM1-216ENST00000533078 SLC16A2P36021 539 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
CMTM1-216ENST00000533078 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 MIER1Q8N108 512 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 DNERQ8NFT8 737 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 HLA-CQ95604 372 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
CMTM1-216ENST00000533078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CMTM1-216ENST00000533078 NMT2O60551 498 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 PARNO95453 639 aaKnown RBP13.59□□□□□ -0.23
CMTM1-216ENST00000533078 TXNP10599 105 aaKnown RBP13.59□□□□□ -0.23
CMTM1-216ENST00000533078 KCNQ1P51787 676 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 BTNL9Q6UXG8 535 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms