RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 POU3F3P20264 500 aaPredicted RBP15.98■□□□□ 0.15
HIF3A-212ENST00000529205 TFF2Q03403 129 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 PPARAQ07869 468 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 MTG1Q9BT17 334 aaPredicted RBP15.98■□□□□ 0.15
HIF3A-212ENST00000529205 WDR11Q9BZH6 1224 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 FTOQ9C0B1 505 aaKnown RBP eCLIP15.98■□□□□ 0.15
HIF3A-212ENST00000529205 TRMT13Q9NUP7 481 aaKnown RBP15.98■□□□□ 0.15
HIF3A-212ENST00000529205 MCM3APO60318 1980 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 B4DLN1 442 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 KPNA6O60684 536 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 ICAM1P05362 532 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 CYP2C9P11712 490 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 MRPL12P52815 198 aaKnown RBP15.97■□□□□ 0.15
HIF3A-212ENST00000529205 TTLL4Q14679 1199 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 OR6J1Q8NGC5 347 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 NECAB3Q96P71 396 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-212ENST00000529205 PNMA2Q9UL42 364 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 NOD1Q9Y239 953 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 HCN4Q9Y3Q4 1203 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 MTCH2Q9Y6C9 303 aa15.97■□□□□ 0.15
HIF3A-212ENST00000529205 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.15
HIF3A-212ENST00000529205 KCNQ1P51787 676 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 SNAP25P60880 206 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
HIF3A-212ENST00000529205 BFSP2Q13515 415 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 BAATQ14032 418 aaPredicted RBP15.96■□□□□ 0.15
HIF3A-212ENST00000529205 CCDC96Q2M329 555 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 CERS4Q9HA82 394 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
HIF3A-212ENST00000529205 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 RFXAPO00287 272 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 PTGS1P23219 599 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
HIF3A-212ENST00000529205 PTPN11Q06124 597 aaPredicted RBP15.95■□□□□ 0.14
HIF3A-212ENST00000529205 PDE4DQ08499 809 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 CCDC155Q8N6L0 562 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 ARNTL2Q8WYA1 636 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 HLA-CQ95604 372 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
HIF3A-212ENST00000529205 ARIH1Q9Y4X5 557 aaPredicted RBP15.95■□□□□ 0.14
HIF3A-212ENST00000529205 RANBP6O60518 1105 aaKnown RBP15.94■□□□□ 0.14
HIF3A-212ENST00000529205 BAIAP3O94812 1187 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 IQCF3P0C7M6 154 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 KCNJ6P48051 423 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 PPP2R5BQ15173 497 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 NBPF20Q3BBV1 942 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 TMEM63BQ5T3F8 832 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 NFRKBQ6P4R8 1299 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 RANBP17Q9H2T7 1088 aaKnown RBP15.94■□□□□ 0.14
HIF3A-212ENST00000529205 DDX49Q9Y6V7 483 aaKnown RBP15.94■□□□□ 0.14
HIF3A-212ENST00000529205 GBF1Q92538 1859 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
HIF3A-212ENST00000529205 RBM47A0AV96 593 aaKnown RBP15.93■□□□□ 0.14
HIF3A-212ENST00000529205 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
HIF3A-212ENST00000529205 TSHZ3Q63HK5 1081 aa15.93■□□□□ 0.14
HIF3A-212ENST00000529205 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
HIF3A-212ENST00000529205 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
HIF3A-212ENST00000529205 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
HIF3A-212ENST00000529205 TLL1O43897 1013 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 CALML3P27482 149 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 TAP1Q03518 808 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 SYDE2Q5VT97 1194 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 RNF207Q6ZRF8 634 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 SCFD2Q8WU76 684 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 VWCEQ96DN2 955 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 ZBED2Q9BTP6 218 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 DCTPP1Q9H773 170 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 IL17RBQ9NRM6 502 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
HIF3A-212ENST00000529205 LRRC37A2A6NM11 1700 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 A6NJR5 290 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 NFIBO00712 420 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 NMT2O60551 498 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 PARNO95453 639 aaKnown RBP15.91■□□□□ 0.14
HIF3A-212ENST00000529205 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
HIF3A-212ENST00000529205 SLC16A2P36021 539 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 CHMP4BP1P59074 171 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 CTDSPL2Q05D32 466 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 ZMYM1Q5SVZ6 1142 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 BTNL9Q6UXG8 535 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 DNERQ8NFT8 737 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 LRFN3Q9BTN0 628 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 LMCD1Q9NZU5 365 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 RCAN3Q9UKA8 241 aa15.91■□□□□ 0.14
HIF3A-212ENST00000529205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
HIF3A-212ENST00000529205 TTC28Q96AY4 2481 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 GRB10Q13322 594 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 PTGISQ16647 500 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 CAGE1Q8TC20 777 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 AFAP1L1Q8TED9 768 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 MUC3AQ02505 3323 aa15.9■□□□□ 0.14
HIF3A-212ENST00000529205 TOP1P11387 765 aaKnown RBP15.89■□□□□ 0.13
HIF3A-212ENST00000529205 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms