RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
NUP98-215ENST00000529063 ASTN1O14525 1302 aa7.21□□□□□ -1.26
NUP98-215ENST00000529063 ATP2A1O14983 1001 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 DUSP11O75319 330 aaKnown RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 NDUFB10O96000 172 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 TIMP1P01033 207 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 IFIT2P09913 472 aaKnown RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 HOXB1P14653 301 aaPredicted RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 PTGS1P23219 599 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 COPB2P35606 906 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 SEMA3FQ13275 785 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 ADGRE1Q14246 886 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 HSP90AB4PQ58FF6 505 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 MFSD5Q6N075 450 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 FAM126BQ8IXS8 530 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 MSL3Q8N5Y2 521 aaKnown RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 PRR7Q8TB68 274 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 TIFAQ96CG3 184 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 UCN2Q96RP3 112 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 SLF1Q9BQI6 1058 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 TEX13BQ9BXU2 312 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 ZNF576Q9H609 170 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 ZBTB40Q9NUA8 1239 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 ARPP21Q9UBL0 812 aaPredicted RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 ZHX1Q9UKY1 873 aaPredicted RBP7.2□□□□□ -1.26
NUP98-215ENST00000529063 CNPY2Q9Y2B0 182 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 SLC4A4Q9Y6R1 1079 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 PTPRSQ13332 1948 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 SCN5AQ14524 2016 aa7.2□□□□□ -1.26
NUP98-215ENST00000529063 TANC1Q9C0D5 1861 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 GSG1L2A8MUP6 293 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 F5H6K3 240 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 CD4P01730 458 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 ASGR1P07306 291 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 CFHP08603 1231 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 ACRP10323 421 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 CSF2RAP15509 400 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 GJA9P57773 515 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 NKX3-2P78367 333 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 HNRNPUQ00839 825 aaKnown RBP eCLIP7.19□□□□□ -1.26
NUP98-215ENST00000529063 KLRC3Q07444 240 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 ACVR2BQ13705 512 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 NR6A1Q15406 480 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 CCDC144BQ3MJ40 725 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 SBK1Q52WX2 424 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 FOXD4L5Q5VV16 416 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 RPAP2Q8IXW5 612 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 NUP133Q8WUM0 1156 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 FOXD4L4Q8WXT5 416 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 STRBPQ96SI9 672 aaKnown RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 BCL11AQ9H165 835 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 SLC38A10Q9HBR0 1119 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 RAVER2Q9HCJ3 691 aaKnown RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 CXXC1Q9P0U4 656 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 NYAP2Q9P242 653 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 RAPGEFL1Q9UHV5 662 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 FAM184BQ9ULE4 1060 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 DDX49Q9Y6V7 483 aaKnown RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 ELP1O95163 1332 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 UMODL1Q5DID0 1318 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 MYO9BQ13459 2157 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 PLIN4Q96Q06 1357 aa7.19□□□□□ -1.26
NUP98-215ENST00000529063 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
NUP98-215ENST00000529063 A0A0U1RQG5 324 aaPredicted RBP7.18□□□□□ -1.26
NUP98-215ENST00000529063 ARVCFO00192 962 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 SNPHO15079 494 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 SMARCA5O60264 1052 aaPredicted RBP7.18□□□□□ -1.26
NUP98-215ENST00000529063 RAB11FIP3O75154 756 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 C6orf222P0C671 652 aaPredicted RBP7.18□□□□□ -1.26
NUP98-215ENST00000529063 CYP2C18P33260 490 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 BEX3Q00994 111 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 CNTN2Q02246 1040 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 PPIGQ13427 754 aaKnown RBP eCLIP7.18□□□□□ -1.26
NUP98-215ENST00000529063 TMEM63BQ5T3F8 832 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 MAMSTRQ6ZN01 415 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 ZNF365Q70YC5 407 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 ARMCX2Q7L311 632 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 RASGRP2Q7LDG7 609 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 CCDC144CPQ8IYA2 1237 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 CPXCR1Q8N123 301 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 FAM133AQ8N9E0 248 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 PRPF38AQ8NAV1 312 aaKnown RBP7.18□□□□□ -1.26
NUP98-215ENST00000529063 SLC43A3Q8NBI5 491 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
NUP98-215ENST00000529063 OSBP2Q969R2 916 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 CEP95Q96GE4 821 aa7.18□□□□□ -1.26
NUP98-215ENST00000529063 GLT1D1Q96MS3 346 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms