RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZSCAN25Q6NSZ9 544 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 KCTD1Q719H9 257 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 ALYREFQ86V81 257 aaKnown RBP22.6■■□□□ 1.21
SSRP1-204ENST00000529002 HERC6Q8IVU3 1022 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 SLC9A7Q96T83 725 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 Q9Y3F1 56 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
SSRP1-204ENST00000529002 NBPF20Q3BBV1 942 aa22.59■■□□□ 1.21
SSRP1-204ENST00000529002 RPAP2Q8IXW5 612 aaPredicted RBP22.59■■□□□ 1.21
SSRP1-204ENST00000529002 STAG1Q8WVM7 1258 aa22.59■■□□□ 1.21
SSRP1-204ENST00000529002 FTOQ9C0B1 505 aaKnown RBP eCLIP22.59■■□□□ 1.21
SSRP1-204ENST00000529002 M0R2C6 588 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 IQCF3P0C7M6 154 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 SUPT20HL2P0C7V6 817 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 ACTN1P12814 892 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 TDO2P48775 406 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 DUSP28Q4G0W2 176 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 GIMAP6Q6P9H5 292 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 GDPD5Q8WTR4 605 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 VTA1Q9NP79 307 aa22.58■■□□□ 1.21
SSRP1-204ENST00000529002 HMMRO75330 724 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 FDX1P10109 184 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 SLC1A4P43007 532 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 TKFCQ3LXA3 575 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 FAM160B2Q86V87 743 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 CHURC1Q8WUH1 139 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 WDR11Q9BZH6 1224 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 POLR3EQ9NVU0 708 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
SSRP1-204ENST00000529002 CCER2I3L3R5 266 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 GPAA1O43292 621 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 APPP05067 770 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 TSPY3P0CV98 308 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 TSPY8P0CW00 308 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 TFAP4Q01664 338 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 PHOSPHO2Q8TCD6 241 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 MORC4Q8TE76 937 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 COPS5Q92905 334 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 PRR12Q9ULL5 1215 aa22.56■■□□□ 1.2
SSRP1-204ENST00000529002 PLIN4Q96Q06 1357 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 PI4K2BG5E9Z4 385 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 BAATQ14032 418 aaPredicted RBP22.55■■□□□ 1.2
SSRP1-204ENST00000529002 TSHZ3Q63HK5 1081 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 OR6J1Q8NGC5 347 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 APPBP2Q92624 585 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 MTG1Q9BT17 334 aaPredicted RBP22.55■■□□□ 1.2
SSRP1-204ENST00000529002 MTUS1Q9ULD2 1270 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 CCPG1Q9ULG6 757 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 SYNPO2Q9UMS6 1093 aa22.55■■□□□ 1.2
SSRP1-204ENST00000529002 KIF28PB7ZC32 967 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 ALDH5A1P51649 535 aaPredicted RBP22.54■■□□□ 1.2
SSRP1-204ENST00000529002 CHMP4BP1P59074 171 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 RETREG2Q8NC44 543 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 GMCL1Q96IK5 515 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 INCENPQ9NQS7 918 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 SIP14410 1827 aa22.54■■□□□ 1.2
SSRP1-204ENST00000529002 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
SSRP1-204ENST00000529002 NMT2O60551 498 aa22.53■■□□□ 1.2
SSRP1-204ENST00000529002 RFC2P35250 354 aa22.53■■□□□ 1.2
SSRP1-204ENST00000529002 IFNL3Q8IZI9 196 aa22.53■■□□□ 1.2
SSRP1-204ENST00000529002 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
SSRP1-204ENST00000529002 SEC62Q99442 399 aaKnown RBP22.53■■□□□ 1.2
SSRP1-204ENST00000529002 GPHNQ9NQX3 736 aaPredicted RBP22.53■■□□□ 1.2
SSRP1-204ENST00000529002 ZBTB40Q9NUA8 1239 aa22.53■■□□□ 1.2
SSRP1-204ENST00000529002 NFIBO00712 420 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 CPT1AP50416 773 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 DEFB103AP81534 67 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 GPNMBQ14956 572 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 TCTN1Q2MV58 587 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 TTBK2Q6IQ55 1244 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 RCSD1Q6JBY9 416 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 ZNF287Q9HBT7 754 aa22.52■■□□□ 1.2
SSRP1-204ENST00000529002 RBM47A0AV96 593 aaKnown RBP22.51■■□□□ 1.19
SSRP1-204ENST00000529002 PITPNM1O00562 1244 aa22.51■■□□□ 1.19
SSRP1-204ENST00000529002 WDR5P61964 334 aaKnown RBP22.51■■□□□ 1.19
SSRP1-204ENST00000529002 IL17RBQ9NRM6 502 aa22.51■■□□□ 1.19
SSRP1-204ENST00000529002 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
SSRP1-204ENST00000529002 PLA2G6O60733 806 aa22.5■■□□□ 1.19
SSRP1-204ENST00000529002 SLC16A2P36021 539 aa22.5■■□□□ 1.19
SSRP1-204ENST00000529002 KCNJ6P48051 423 aa22.5■■□□□ 1.19
SSRP1-204ENST00000529002 SLC30A10Q6XR72 485 aa22.5■■□□□ 1.19
SSRP1-204ENST00000529002 UBE2ZQ9H832 354 aaPredicted RBP22.5■■□□□ 1.19
SSRP1-204ENST00000529002 SUGCTQ9HAC7 445 aa22.5■■□□□ 1.19
SSRP1-204ENST00000529002 PTPDC1A2A3K4 754 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 PATL2C9JE40 543 aaKnown RBP22.49■■□□□ 1.19
SSRP1-204ENST00000529002 ICAM1P05362 532 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 IL9P15248 144 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 PDE4BQ07343 736 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 NFRKBQ6P4R8 1299 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 FAM178BQ8IXR5 827 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 CTAGE1Q96RT6 745 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 ZBED2Q9BTP6 218 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 LRRCC1Q9C099 1032 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 MYO7AQ13402 2215 aa22.49■■□□□ 1.19
SSRP1-204ENST00000529002 KCNA5P22460 613 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 CALML3P27482 149 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 PPARAQ07869 468 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 BFSP2Q13515 415 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms