RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 OR6J1Q8NGC5 347 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
MRPS28-206ENST00000520946 WNT8AQ9H1J5 351 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 TRMT13Q9NUP7 481 aaKnown RBP13.6□□□□□ -0.23
MRPS28-206ENST00000520946 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 ZNF536O15090 1300 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 PLA2G6O60733 806 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 CA3P07451 260 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 CALML3P27482 149 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 TFF2Q03403 129 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 PDE4DQ08499 809 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 BAATQ14032 418 aaPredicted RBP13.59□□□□□ -0.23
MRPS28-206ENST00000520946 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 ARNTL2Q8WYA1 636 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
MRPS28-206ENST00000520946 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
MRPS28-206ENST00000520946 GRIN2DO15399 1336 aa13.59□□□□□ -0.23
MRPS28-206ENST00000520946 KPNA6O60684 536 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 ICAM1P05362 532 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 PTGS1P23219 599 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 RFC2P35250 354 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 PLA2G5P39877 138 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 KCNJ6P48051 423 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 BFSP2Q13515 415 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 PPP2R5BQ15173 497 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 PNMA2Q9UL42 364 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 COG5Q9UP83 839 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
MRPS28-206ENST00000520946 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
MRPS28-206ENST00000520946 RFXAPO00287 272 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 BMP1P13497 986 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 SLC16A2P36021 539 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-206ENST00000520946 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
MRPS28-206ENST00000520946 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
MRPS28-206ENST00000520946 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 PHOSPHO2Q8TCD6 241 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 PURBQ96QR8 312 aaKnown RBP13.57□□□□□ -0.24
MRPS28-206ENST00000520946 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
MRPS28-206ENST00000520946 SEC62Q99442 399 aaKnown RBP13.57□□□□□ -0.24
MRPS28-206ENST00000520946 NKRFO15226 690 aaKnown RBP eCLIP13.56□□□□□ -0.24
MRPS28-206ENST00000520946 TLL1O43897 1013 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 NMT2O60551 498 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 KCNQ1P51787 676 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 SYDE2Q5VT97 1194 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 MIER1Q8N108 512 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 HLA-CQ95604 372 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 MTCH2Q9Y6C9 303 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 TTC41PQ6P2S7 1318 aa13.56□□□□□ -0.24
MRPS28-206ENST00000520946 TCF20Q9UGU0 1960 aaKnown RBP13.55□□□□□ -0.24
MRPS28-206ENST00000520946 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
MRPS28-206ENST00000520946 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
MRPS28-206ENST00000520946 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
MRPS28-206ENST00000520946 TMEM63BQ5T3F8 832 aa13.55□□□□□ -0.24
MRPS28-206ENST00000520946 NFRKBQ6P4R8 1299 aa13.55□□□□□ -0.24
MRPS28-206ENST00000520946 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
MRPS28-206ENST00000520946 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-206ENST00000520946 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
MRPS28-206ENST00000520946 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
MRPS28-206ENST00000520946 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
MRPS28-206ENST00000520946 PTGISQ16647 500 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 MORC4Q8TE76 937 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 RANBP17Q9H2T7 1088 aaKnown RBP13.54□□□□□ -0.24
MRPS28-206ENST00000520946 INCENPQ9NQS7 918 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 IL17RBQ9NRM6 502 aa13.54□□□□□ -0.24
MRPS28-206ENST00000520946 VCANP13611 3396 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 GBF1Q92538 1859 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 NFIBO00712 420 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 TMEM31Q5JXX7 168 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
MRPS28-206ENST00000520946 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-206ENST00000520946 TAP1Q03518 808 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 KRT40Q6A162 431 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 SLC30A10Q6XR72 485 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 DNERQ8NFT8 737 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 CAGE1Q8TC20 777 aa13.52□□□□□ -0.25
MRPS28-206ENST00000520946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
MRPS28-206ENST00000520946 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
MRPS28-206ENST00000520946 MX1P20591 662 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms