RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-216ENST00000520868 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 NKD1Q969G9 470 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 KIF2CQ99661 725 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 DUSP15Q9H1R2 295 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-216ENST00000520868 C19orf73Q9NVV2 129 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
PABPC1-216ENST00000520868 POLR3AO14802 1390 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-216ENST00000520868 SRFP11831 508 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 TPP2P29144 1249 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-216ENST00000520868 MCM4P33991 863 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 RNF4P78317 190 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 FANCCQ00597 558 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 SLITRK4Q8IW52 837 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 RNF34Q969K3 372 aa8.32□□□□□ -1.08
PABPC1-216ENST00000520868 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.32□□□□□ -1.08
PABPC1-216ENST00000520868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
PABPC1-216ENST00000520868 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 C8AP07357 584 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 GDNFP39905 211 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 RAD51AP2Q09MP3 1159 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 CDCP2Q5VXM1 449 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 TSPYL5Q86VY4 417 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-216ENST00000520868 ZSWIM9Q86XI8 627 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 POU5F2Q8N7G0 328 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 TMEM40Q8WWA1 233 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 PPP1R1BQ9UD71 204 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-216ENST00000520868 DUSP13Q9UII6 198 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
PABPC1-216ENST00000520868 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 CRYBG1Q9Y4K1 1723 aa8.31□□□□□ -1.08
PABPC1-216ENST00000520868 USP19O94966 1318 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 SCAMP3O14828 347 aaKnown RBP8.3□□□□□ -1.08
PABPC1-216ENST00000520868 LRRN2O75325 713 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 ESR1P03372 595 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 CCNFP41002 786 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 KCNMB1Q16558 191 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 GAB4Q2WGN9 574 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 OVOS1Q6IE37 1185 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 TOM1L2Q6ZVM7 507 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-216ENST00000520868 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 SPON1Q9HCB6 807 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 SLAMF8Q9P0V8 285 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 CPDO75976 1380 aa8.3□□□□□ -1.08
PABPC1-216ENST00000520868 CENPJQ9HC77 1338 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 ARHGEF28Q8N1W1 1705 aaKnown RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 TNS1Q9HBL0 1735 aaKnown RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 KCNQ2O43526 872 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 YY1P25490 414 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 CLCQ05315 142 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 DDB1Q16531 1140 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 NLRC3Q7RTR2 1065 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 PTF1AQ7RTS3 328 aa8.29□□□□□ -1.08
PABPC1-216ENST00000520868 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-216ENST00000520868 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-216ENST00000520868 RAC2P15153 192 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 CLEC16AQ2KHT3 1053 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-216ENST00000520868 ATG4CQ96DT6 458 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 LIN37Q96GY3 246 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-216ENST00000520868 FAM53CQ9NYF3 392 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 TMEM59LQ9UK28 342 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 ITSN1Q15811 1721 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 CRB1P82279 1406 aa8.28□□□□□ -1.08
PABPC1-216ENST00000520868 NRKQ7Z2Y5 1582 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 PLSCR1O15162 318 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 UBOX5O94941 541 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 RECKO95980 971 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 IMPDH2P12268 514 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 ZNF124Q15973 351 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 RALGPS1Q5JS13 557 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.09
PABPC1-216ENST00000520868 VWCEQ96DN2 955 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 KIRREL1Q96J84 757 aa8.27□□□□□ -1.09
PABPC1-216ENST00000520868 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-216ENST00000520868 ARID1BQ8NFD5 2236 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-216ENST00000520868 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
PABPC1-216ENST00000520868 DNAJC25-GNG10A0A024R161 153 aa8.26□□□□□ -1.09
PABPC1-216ENST00000520868 EGR3Q06889 387 aa8.26□□□□□ -1.09
PABPC1-216ENST00000520868 ZNF394Q53GI3 561 aa8.26□□□□□ -1.09
PABPC1-216ENST00000520868 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-216ENST00000520868 PDGFDQ9GZP0 370 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-216ENST00000520868 PCDHGB7Q9Y5F8 929 aa8.26□□□□□ -1.09
PABPC1-216ENST00000520868 BRD4O60885 1362 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-216ENST00000520868 LMO7Q8WWI1 1683 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 EXOC5O00471 708 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 CLEC3AO75596 197 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms