RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 ABRAQ8N0Z2 381 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 ANKRD35Q8N283 1001 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 A1CFQ9NQ94 594 aaKnown RBP20.42■□□□□ 0.86
SDC2-205ENST00000520233 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 STX6O43752 255 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 DDIT3P35638 169 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 KRT2P35908 639 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 CLK2P49760 499 aaKnown RBP20.41■□□□□ 0.86
SDC2-205ENST00000520233 LACTBP83111 547 aaPredicted RBP20.41■□□□□ 0.86
SDC2-205ENST00000520233 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 USP17L6PQ6QN14 398 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 MMP19Q99542 508 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 CYP39A1Q9NYL5 469 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 IVNS1ABPQ9Y6Y0 642 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 PFASO15067 1338 aa20.41■□□□□ 0.86
SDC2-205ENST00000520233 M0R2N6 131 aa20.4■□□□□ 0.86
SDC2-205ENST00000520233 PTPREP23469 700 aa20.4■□□□□ 0.86
SDC2-205ENST00000520233 HOXA13P31271 388 aaPredicted RBP20.4■□□□□ 0.86
SDC2-205ENST00000520233 RPS6P62753 249 aaKnown RBP20.4■□□□□ 0.86
SDC2-205ENST00000520233 BAATQ14032 418 aaPredicted RBP20.4■□□□□ 0.86
SDC2-205ENST00000520233 UBE2SQ16763 222 aa20.4■□□□□ 0.86
SDC2-205ENST00000520233 SLC30A10Q6XR72 485 aa20.4■□□□□ 0.86
SDC2-205ENST00000520233 DIS3L2Q8IYB7 885 aaKnown RBP20.4■□□□□ 0.86
SDC2-205ENST00000520233 REXO1Q8N1G1 1221 aaKnown RBP20.4■□□□□ 0.86
SDC2-205ENST00000520233 VPS37CA5D8V6 355 aaPredicted RBP20.39■□□□□ 0.85
SDC2-205ENST00000520233 SLC15A5A6NIM6 579 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 ADAMTS3O15072 1205 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 FCGRTP55899 365 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 KIF22Q14807 665 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 OXER1Q8TDS5 423 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 SYTL5Q8TDW5 730 aaPredicted RBP20.39■□□□□ 0.85
SDC2-205ENST00000520233 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.85
SDC2-205ENST00000520233 BIN2Q9UBW5 565 aaPredicted RBP20.39■□□□□ 0.85
SDC2-205ENST00000520233 PCDHA6Q9UN73 950 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 MTMR6Q9Y217 621 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 PCDHA8Q9Y5H6 950 aa20.39■□□□□ 0.85
SDC2-205ENST00000520233 BTBD18B2RXH4 712 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
SDC2-205ENST00000520233 FKTNO75072 461 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 FOSP01100 380 aaPredicted RBP20.38■□□□□ 0.85
SDC2-205ENST00000520233 CTGFP29279 349 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 PSMC4P43686 418 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 AP3B2Q13367 1082 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 GRB14Q14449 540 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 TMEM260Q9NX78 707 aa20.38■□□□□ 0.85
SDC2-205ENST00000520233 RBBP6Q7Z6E9 1792 aaKnown RBP20.38■□□□□ 0.85
SDC2-205ENST00000520233 DNAJC25-GNG10A0A024R161 153 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 SPDYE3A6NKU9 549 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 POTEB2H3BUK9 544 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 U2AF2P26368 475 aaKnown RBP eCLIP20.37■□□□□ 0.85
SDC2-205ENST00000520233 ADORA2AP29274 412 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 NR5A1Q13285 461 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
SDC2-205ENST00000520233 MORN1Q5T089 497 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 JAKMIP3Q5VZ66 844 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 KRT25Q7Z3Z0 450 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 FCHSD1Q86WN1 690 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 RASGRP4Q8TDF6 673 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 TNFRSF25Q93038 417 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 COL20A1Q9P218 1284 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 TSKSQ9UJT2 592 aa20.37■□□□□ 0.85
SDC2-205ENST00000520233 ECM2O94769 699 aaPredicted RBP20.36■□□□□ 0.85
SDC2-205ENST00000520233 FAM133AQ8N9E0 248 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 CD99L2Q8TCZ2 262 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 ZNF296Q8WUU4 475 aaPredicted RBP20.36■□□□□ 0.85
SDC2-205ENST00000520233 ERO1AQ96HE7 468 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 ANO3Q9BYT9 981 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 ARHGAP39Q9C0H5 1083 aa20.36■□□□□ 0.85
SDC2-205ENST00000520233 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
SDC2-205ENST00000520233 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 PGK2P07205 417 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
SDC2-205ENST00000520233 CNTN2Q02246 1040 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 PKP1Q13835 747 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 DNERQ8NFT8 737 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 SOCS4Q8WXH5 440 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 TAAR1Q96RJ0 339 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 NUDT12Q9BQG2 462 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 EHMT1Q9H9B1 1298 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 GJD2Q9UKL4 321 aa20.35■□□□□ 0.85
SDC2-205ENST00000520233 PLXNB2O15031 1838 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 ZNF236Q9UL36 1845 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 CCDC194A0A1B0GVG4 234 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 COBLO75128 1261 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 BRD1O95696 1058 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 NUCB2P80303 420 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 ARHGEF6Q15052 776 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 NONOQ15233 471 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDC2-205ENST00000520233 ZNF792Q3KQV3 632 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 USP6NLQ92738 828 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 PURBQ96QR8 312 aaKnown RBP20.34■□□□□ 0.85
SDC2-205ENST00000520233 ZSCAN16Q9H4T2 348 aaPredicted RBP20.34■□□□□ 0.85
SDC2-205ENST00000520233 SLC5A4Q9NY91 659 aa20.34■□□□□ 0.85
SDC2-205ENST00000520233 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
SDC2-205ENST00000520233 FRMPD4Q14CM0 1322 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms