RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 HLA-CQ95604 372 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 NACAP1Q9BZK3 213 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 FTOQ9C0B1 505 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 CERS4Q9HA82 394 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 DDX19BQ9UMR2 479 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 GRIN2DO15399 1336 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.69
LINCR-0001-201ENST00000517732 RFXAPO00287 272 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 CHGBP05060 677 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 ZFYP08048 801 aaPredicted RBP10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 MYL3P08590 195 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 CYP2C9P11712 490 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 KCNJ6P48051 423 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 BFSP2Q13515 415 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 NEDD1Q8NHV4 660 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 MTG1Q9BT17 334 aaPredicted RBP10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 LRRCC1Q9C099 1032 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 TRMT13Q9NUP7 481 aaKnown RBP10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 CYP39A1Q9NYL5 469 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 NOD1Q9Y239 953 aa10.76□□□□□ -0.69
LINCR-0001-201ENST00000517732 BRWD1Q9NSI6 2320 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 GPAA1O43292 621 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 BAIAP3O94812 1187 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 KBTBD3Q8NAB2 608 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 OR6J1Q8NGC5 347 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 GMCL1Q96IK5 515 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 WDR11Q9BZH6 1224 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 CCPG1Q9ULG6 757 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 MYH6P13533 1939 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 ZNF536O15090 1300 aa10.75□□□□□ -0.69
LINCR-0001-201ENST00000517732 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 TLL1O43897 1013 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 KPNA6O60684 536 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 PLA2G6O60733 806 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 GPR37L1O60883 481 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 MCCP23508 829 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 ALDH5A1P51649 535 aaPredicted RBP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 HNRNPUQ00839 825 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 TFAP4Q01664 338 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 TAP1Q03518 808 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 PTPN11Q06124 597 aaPredicted RBP10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 RCSD1Q6JBY9 416 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 IFNL3Q8IZI9 196 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 ZBED2Q9BTP6 218 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 ECHDC1Q9NTX5 307 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 LMCD1Q9NZU5 365 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 KIAA1217Q5T5P2 1943 aa10.74□□□□□ -0.69
LINCR-0001-201ENST00000517732 TSPY2A6NKD2 308 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 B4DLN1 442 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 IQCF3P0C7M6 154 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 PTGS1P23219 599 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 GRB10Q13322 594 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 PPP2R5BQ15173 497 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 CCDC96Q2M329 555 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 MUM1L1Q5H9M0 696 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 KRT40Q6A162 431 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 NFRKBQ6P4R8 1299 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 OSBP2Q969R2 916 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 NAPBQ9H115 298 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 EPB41L4AQ9HCS5 686 aaPredicted RBP10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 PRR12Q9ULL5 1215 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 MYH7BA7E2Y1 1941 aa10.73□□□□□ -0.69
LINCR-0001-201ENST00000517732 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 EPOPA6NHQ4 379 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 ICAM1P05362 532 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 PPARAQ07869 468 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 PDE4DQ08499 809 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 VWCEQ96DN2 955 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 CRBNQ96SW2 442 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 ZBTB40Q9NUA8 1239 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
LINCR-0001-201ENST00000517732 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms