RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 BAATQ14032 418 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PPP2R5BQ15173 497 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 AAK1Q2M2I8 961 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ZMYM1Q5SVZ6 1142 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SYDE2Q5VT97 1194 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DEFB128Q7Z7B8 93 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FAM133AQ8N9E0 248 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ATXN2LQ8WWM7 1075 aaKnown RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ZBED2Q9BTP6 218 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 UPF3AQ9H1J1 476 aaKnown RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 NKX2-4Q9H2Z4 354 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CYP39A1Q9NYL5 469 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 Q9Y3F1 56 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ALPK3Q96L96 1907 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 NMT2O60551 498 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KPNA6O60684 536 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PLA2G6O60733 806 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ATP2A2P16615 1042 aaKnown RBP8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KCNJ6P48051 423 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MRPS5P82675 430 aaKnown RBP8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CCSAPQ6IQ19 270 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 HERVK_113Q902F9 699 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ESR2Q92731 530 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MTG1Q9BT17 334 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PDGFCQ9NRA1 345 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 HELLSQ9NRZ9 838 aa8.65□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CDK5RAP2Q96SN8 1893 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ZNF236Q9UL36 1845 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ZNF213O14771 459 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 B4GALT4O60513 344 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PFKMP08237 780 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TXNP10599 105 aaKnown RBP8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CYP2C9P11712 490 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 HAND2P61296 217 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 BFSP2Q13515 415 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TTLL4Q14679 1199 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 USH1GQ495M9 461 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DUSP28Q4G0W2 176 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MCMDC2Q4G0Z9 681 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CCDC178Q5BJE1 867 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MUM1L1Q5H9M0 696 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CHST3Q7LGC8 479 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 IQCA1Q86XH1 822 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 KAT14Q9H8E8 782 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 INCENPQ9NQS7 918 aa8.64□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TNKSO95271 1327 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 LOC102724159A0A0B4J2E5 919 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ADCY6O43306 1168 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CD4P01730 458 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PCP11498 1178 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RFC2P35250 354 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RABGGTBP53611 331 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PWP2Q15269 919 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 AKNAD1Q5T1N1 836 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GPATCH4Q5T3I0 446 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TTBK2Q6IQ55 1244 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MCF2L2Q86YR7 1114 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PI4K2BQ8TCG2 481 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 OTUD7AQ8TE49 926 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SCLYQ96I15 445 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TTC14Q96N46 770 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ASB2Q96Q27 587 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 UHRF1Q96T88 793 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TMEM47Q9BQJ4 181 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NOC4LQ9BVI4 516 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ALDH8A1Q9H2A2 487 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 VAT1LQ9HCJ6 419 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DIAPH3Q9NSV4 1193 aa8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TRMT13Q9NUP7 481 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PLIN4Q96Q06 1357 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ZNF536O15090 1300 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NFIBO00712 420 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ORC4O43929 436 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 FGAP02671 866 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CASTP20810 708 aaKnown RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RPS6P62753 249 aaKnown RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 VPS53Q5VIR6 699 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ARHGEF16Q5VV41 709 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TAPT1Q6NXT6 567 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SEPT14Q6ZU15 432 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 C7orf31Q8N865 590 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DNERQ8NFT8 737 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms