RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 LCTP09848 1927 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 CHD7Q9P2D1 2997 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 EPOPA6NHQ4 379 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 PLA2G6O60733 806 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 BAIAP3O94812 1187 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 GNAT2P19087 354 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 SLC1A4P43007 532 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 TDO2P48775 406 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
DDR1-276ENST00000514534 BFSP2Q13515 415 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
DDR1-276ENST00000514534 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
DDR1-276ENST00000514534 FTOQ9C0B1 505 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDR1-276ENST00000514534 RAD50Q92878 1312 aa12.11□□□□□ -0.47
DDR1-276ENST00000514534 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
DDR1-276ENST00000514534 PI4K2BG5E9Z4 385 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 PRDM1O75626 825 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
DDR1-276ENST00000514534 MYL3P08590 195 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 IQCF3P0C7M6 154 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 KCNJ6P48051 423 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 PTPN11Q06124 597 aaPredicted RBP12.1□□□□□ -0.47
DDR1-276ENST00000514534 PDE4BQ07343 736 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 GRB10Q13322 594 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 KRT40Q6A162 431 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 NEDD1Q8NHV4 660 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 APPBP2Q92624 585 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 CYP39A1Q9NYL5 469 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
DDR1-276ENST00000514534 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDR1-276ENST00000514534 KPNA6O60684 536 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 APPP05067 770 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
DDR1-276ENST00000514534 PTGS1P23219 599 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
DDR1-276ENST00000514534 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 OR6J1Q8NGC5 347 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 PANK1Q8TE04 598 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 MPHOSPH6Q99547 160 aaKnown RBP12.09□□□□□ -0.47
DDR1-276ENST00000514534 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 CHMP4BQ9H444 224 aaKnown RBP12.09□□□□□ -0.47
DDR1-276ENST00000514534 C11orf16Q9NQ32 467 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 NOD1Q9Y239 953 aa12.09□□□□□ -0.47
DDR1-276ENST00000514534 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 PRR33A8MZF0 331 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 GPAA1O43292 621 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 LPXNO60711 386 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 ALDH5A1P51649 535 aaPredicted RBP12.08□□□□□ -0.48
DDR1-276ENST00000514534 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 MUM1L1Q5H9M0 696 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 TMEM63BQ5T3F8 832 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
DDR1-276ENST00000514534 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 SIP14410 1827 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 TRANK1O15050 2925 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
DDR1-276ENST00000514534 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 ICAM1P05362 532 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 MCCP23508 829 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 TFAP4Q01664 338 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 ALYREFQ86V81 257 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 CAGE1Q8TC20 777 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDR1-276ENST00000514534 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
DDR1-276ENST00000514534 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
DDR1-276ENST00000514534 REV3LO60673 3130 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 B4DLN1 442 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 ARHGEF15O94989 841 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 ALADP13716 330 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
DDR1-276ENST00000514534 BAATQ14032 418 aaPredicted RBP12.06□□□□□ -0.48
DDR1-276ENST00000514534 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 AFAP1L1Q8TED9 768 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
DDR1-276ENST00000514534 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms