RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 ANAPC4Q9UJX5 808 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 CHD7Q9P2D1 2997 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 CYP7A1P22680 504 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 PLCD1P51178 756 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 EXOSC10Q01780 885 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 CLEC10AQ8IUN9 316 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 CHMP4CQ96CF2 233 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 NOC4LQ9BVI4 516 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 NACAP1Q9BZK3 213 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 TRPV6Q9H1D0 765 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 KCNH6Q9H252 994 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
PDLIM5-217ENST00000512274 GSG1L2A8MUP6 293 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 MBD4O95243 580 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 AK2P54819 239 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 EVX2Q03828 476 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 CXCL17Q6UXB2 119 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 TTC6Q86TZ1 520 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 GDPD5Q8WTR4 605 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 EHD4Q9H223 541 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 UBE2ZQ9H832 354 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
PDLIM5-217ENST00000512274 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 E7EWF7 191 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 ZNF213O14771 459 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 DCXO43602 365 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 B4GALT4O60513 344 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 LPXNO60711 386 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 FGRP09769 529 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 KCNA5P22460 613 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 STAT3P40763 770 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 GJA9P57773 515 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 ACVR2BQ13705 512 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 STOX1Q6ZVD7 989 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 HFE2Q6ZVN8 426 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 IFNL3Q8IZI9 196 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 DDX11Q96FC9 970 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 UPF3AQ9H1J1 476 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 EPB41L4AQ9HCS5 686 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 FBXO28Q9NVF7 368 aa12.23□□□□□ -0.45
PDLIM5-217ENST00000512274 MYH8P13535 1937 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 CTAGE5O15320 804 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 PSMC6P62333 389 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 NUCB2P80303 420 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 NOL8Q76FK4 1167 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 AGBL1Q96MI9 1066 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 CNNM2Q9H8M5 875 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
PDLIM5-217ENST00000512274 PTPRSQ13332 1948 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 ZNF536O15090 1300 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 GRIN2DO15399 1336 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 KIF28PB7ZC32 967 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 RAD21O60216 631 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 PTGS1P23219 599 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 RCAN1P53805 252 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 CRNKL1Q9BZJ0 848 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 NAPBQ9H115 298 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 RNF41Q9H4P4 317 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 ARMT1Q9H993 441 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
PDLIM5-217ENST00000512274 VWA5AO00534 786 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 PRKAB2O43741 272 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 CYP2C9P11712 490 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 MCM5P33992 734 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 MAMDC4Q6UXC1 1216 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 SIAH1Q8IUQ4 282 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms