RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 NOB1Q9ULX3 412 aaKnown RBP7.82□□□□□ -1.16
CLDND1-225ENST00000512147 BARX2Q9UMQ3 279 aaPredicted RBP7.82□□□□□ -1.16
CLDND1-225ENST00000512147 DIS3Q9Y2L1 958 aaKnown RBP7.82□□□□□ -1.16
CLDND1-225ENST00000512147 PCDHGA2Q9Y5H1 932 aa7.82□□□□□ -1.16
CLDND1-225ENST00000512147 NOTCH2Q04721 2471 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 UBR5O95071 2799 aaPredicted RBP7.81□□□□□ -1.16
CLDND1-225ENST00000512147 TK2O00142 265 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 GDF9O60383 454 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 LRP3O75074 770 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 KCNK5O95279 499 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 BEX3Q00994 111 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 KCNC4Q03721 635 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 IKBKEQ14164 716 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 LRRFIP1Q32MZ4 808 aaKnown RBP7.81□□□□□ -1.16
CLDND1-225ENST00000512147 ZNF528Q3MIS6 628 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 SPECC1Q5M775 1068 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 CNKSR3Q6P9H4 555 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 SP7Q8TDD2 431 aaPredicted RBP7.81□□□□□ -1.16
CLDND1-225ENST00000512147 C11orf84Q9BUA3 381 aaPredicted RBP7.81□□□□□ -1.16
CLDND1-225ENST00000512147 SPATC1LQ9H0A9 340 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 TRMT13Q9NUP7 481 aaKnown RBP7.81□□□□□ -1.16
CLDND1-225ENST00000512147 PTPRSQ13332 1948 aa7.81□□□□□ -1.16
CLDND1-225ENST00000512147 PI4KAP2A4QPH2 592 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 GRM6O15303 877 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 ZEB2O60315 1214 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 SEC24BO95487 1268 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 RB1P06400 928 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 HOXD8P13378 290 aaPredicted RBP7.8□□□□□ -1.16
CLDND1-225ENST00000512147 NCLP19338 710 aaKnown RBP7.8□□□□□ -1.16
CLDND1-225ENST00000512147 HTRA4P83105 476 aaPredicted RBP7.8□□□□□ -1.16
CLDND1-225ENST00000512147 FKBP5Q13451 457 aaPredicted RBP7.8□□□□□ -1.16
CLDND1-225ENST00000512147 PICALMQ13492 652 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 BFSP2Q13515 415 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 DIXDC1Q155Q3 683 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 KSR2Q6VAB6 950 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 PRR23CQ6ZRP0 262 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 PI4KAP1Q8N8J0 262 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLDND1-225ENST00000512147 ARHGAP45Q92619 1136 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 NEK1Q96PY6 1258 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 RAB23Q9ULC3 237 aa7.8□□□□□ -1.16
CLDND1-225ENST00000512147 PTPRCP08575 1304 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 SPDYE16A6NNV3 312 aaPredicted RBP7.79□□□□□ -1.16
CLDND1-225ENST00000512147 F6X3S4 739 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 C1QL1O75973 258 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 CSPG5O95196 566 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
CLDND1-225ENST00000512147 PGK2P07205 417 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 ASGR2P07307 311 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 PSMC6P62333 389 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 PLS1Q14651 629 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 CCDC6Q16204 474 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 CAVIN4Q5BKX8 364 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 PROSER1Q86XN7 944 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 MSL3Q8N5Y2 521 aaKnown RBP7.79□□□□□ -1.16
CLDND1-225ENST00000512147 SLC39A7Q92504 469 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 FRAT1Q92837 279 aaPredicted RBP7.79□□□□□ -1.16
CLDND1-225ENST00000512147 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 LRIG1Q96JA1 1093 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 YME1L1Q96TA2 773 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 SCNM1Q9BWG6 230 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 SEMA4GQ9NTN9 838 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 TNNQ9UQP3 1299 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 MAP3K2Q9Y2U5 619 aa7.79□□□□□ -1.16
CLDND1-225ENST00000512147 MYH3P11055 1940 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 CACNA1IQ9P0X4 2223 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 LOC400499M0QZD8 3231 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 TM4SF5O14894 197 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 CTAGE5O15320 804 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 IPO8O15397 1037 aaKnown RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 AMHP03971 560 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 TRIM27P14373 513 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 CTNNB1P35222 781 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 NRIP1P48552 1158 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 NKX3-2P78367 333 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 CSRP2Q16527 193 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 ZKSCAN2Q63HK3 967 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 ATF7IPQ6VMQ6 1270 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 NOL8Q76FK4 1167 aaKnown RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 RBM23Q86U06 439 aaKnown RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 ZNF513Q8N8E2 541 aaPredicted RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 DNAAF4Q8WXU2 420 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 MMP19Q99542 508 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 METTL22Q9BUU2 404 aaPredicted RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 API5Q9BZZ5 524 aaKnown RBP7.78□□□□□ -1.16
CLDND1-225ENST00000512147 HOXC10Q9NYD6 342 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 WASF3Q9UPY6 502 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 DMXL2Q8TDJ6 3036 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
CLDND1-225ENST00000512147 CACNA1FO60840 1977 aa7.77□□□□□ -1.17
CLDND1-225ENST00000512147 C2CD4DB7Z1M9 353 aa7.77□□□□□ -1.17
CLDND1-225ENST00000512147 PARNO95453 639 aaKnown RBP7.77□□□□□ -1.17
CLDND1-225ENST00000512147 GLP2RO95838 553 aa7.77□□□□□ -1.17
CLDND1-225ENST00000512147 SNAI1O95863 264 aaPredicted RBP7.77□□□□□ -1.17
CLDND1-225ENST00000512147 IGKV5-2P06315 115 aa7.77□□□□□ -1.17
CLDND1-225ENST00000512147 CENPBP07199 599 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms