RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 VTA1Q9NP79 307 aa15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 SYNPO2Q9UMS6 1093 aa15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 Q9Y3F1 56 aa15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 ARIH1Q9Y4X5 557 aaPredicted RBP15.73■□□□□ 0.11
POLR2J3-216ENST00000511773 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 MCCP23508 829 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 PURAQ00577 322 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 GRB10Q13322 594 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 TKFCQ3LXA3 575 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 RASGRP2Q7LDG7 609 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 STAG1Q8WVM7 1258 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 C11orf16Q9NQ32 467 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
POLR2J3-216ENST00000511773 KIF28PB7ZC32 967 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 GPAA1O43292 621 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 OR6J1Q8NGC5 347 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 PHOSPHO2Q8TCD6 241 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 APPBP2Q92624 585 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 MTG1Q9BT17 334 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 GPHNQ9NQX3 736 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 CCPG1Q9ULG6 757 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 MTMR7Q9Y216 660 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
POLR2J3-216ENST00000511773 PTPRSQ13332 1948 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 M0R2C6 588 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 RFC2P35250 354 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 CPT1AP50416 773 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 TFAP4Q01664 338 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 NBPF20Q3BBV1 942 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 DUSP28Q4G0W2 176 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 TMCO2Q7Z6W1 182 aaPredicted RBP15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 GMCL1Q96IK5 515 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 PRR12Q9ULL5 1215 aa15.7■□□□□ 0.1
POLR2J3-216ENST00000511773 SCN10AQ9Y5Y9 1956 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 LCHNA4D1U4 455 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 LPXNO60711 386 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 GPR37L1O60883 481 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 IQCF3P0C7M6 154 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 PDE4BQ07343 736 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 TSHZ3Q63HK5 1081 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 CD320Q9NPF0 282 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 STX8Q9UNK0 236 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 NOD1Q9Y239 953 aa15.69■□□□□ 0.1
POLR2J3-216ENST00000511773 RNF113AO15541 343 aaKnown RBP15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 GNAT2P19087 354 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 KCNJ6P48051 423 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 ALDH5A1P51649 535 aaPredicted RBP15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 BAATQ14032 418 aaPredicted RBP15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 IFNL3Q8IZI9 196 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 MORC4Q8TE76 937 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 ZBTB40Q9NUA8 1239 aa15.68■□□□□ 0.1
POLR2J3-216ENST00000511773 TRIP12Q14669 1992 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 PTPDC1A2A3K4 754 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 NMT2O60551 498 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 BFSP2Q13515 415 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 NFRKBQ6P4R8 1299 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 ALYREFQ86V81 257 aaKnown RBP15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 NACAP1Q9BZK3 213 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 ADD3Q9UEY8 706 aaKnown RBP15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 RAD50Q92878 1312 aa15.67■□□□□ 0.1
POLR2J3-216ENST00000511773 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 NFIBO00712 420 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 ICAM1P05362 532 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 CALML3P27482 149 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 PPP2R5BQ15173 497 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 COPS5Q92905 334 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 NAPBQ9H115 298 aa15.66■□□□□ 0.1
POLR2J3-216ENST00000511773 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 PI4K2BG5E9Z4 385 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 RBAK-RBAKDNI3L0D1 243 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 PLA2G6O60733 806 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 ZFYP08048 801 aaPredicted RBP15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 MS4A1P11836 297 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 SLC16A2P36021 539 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 DEFB103AP81534 67 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms