RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TMEM145Q8NBT3 493 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 INTS4Q96HW7 963 aaKnown RBP10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 SLC6A17Q9H1V8 727 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 ECI1P42126 302 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 IRF2BP1Q8IU81 584 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 JMYQ8N9B5 988 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 IER2Q9BTL4 223 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 FAM53CQ9NYF3 392 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 PFDN2Q9UHV9 154 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 CFTRP13569 1480 aa10.22□□□□□ -0.77
TRAPPC11-206ENST00000509857 TRAV20A0A0B4J274 112 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 DLX3O60479 287 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 PRKCAP17252 672 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 MVKQ03426 396 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 LAPTM5Q13571 262 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 LONRF2Q1L5Z9 754 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 MBLAC2Q68D91 279 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 DENND5AQ6IQ26 1287 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 NUP43Q8NFH3 380 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 KCTD13Q8WZ19 329 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 OSBP2Q969R2 916 aa10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 LIN37Q96GY3 246 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC11-206ENST00000509857 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 KCNAB2Q13303 367 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 BMS1Q14692 1282 aaKnown RBP10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 PRSS53Q2L4Q9 553 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 CPNE8Q86YQ8 564 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 ZBTB38Q8NAP3 1195 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 FMNL2Q96PY5 1086 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 DNAJC7Q99615 494 aa10.2□□□□□ -0.78
TRAPPC11-206ENST00000509857 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 ARNTLO00327 626 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 PAX4O43316 350 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 MSL3P1P0C860 447 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 PABPC1P11940 636 aaKnown RBP10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 KCNJ6P48051 423 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 GALK1P51570 392 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 ERVFRD-1P60508 538 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 CCDC103Q8IW40 242 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 ZSWIM4Q9H7M6 989 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 TNFRSF12AQ9NP84 129 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 PDLIM7Q9NR12 457 aa10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 TMEFF2Q9UIK5 374 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC11-206ENST00000509857 C7orf72A4D263 438 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 MEFVO15553 781 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 PRODHO43272 600 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 CYP4F8P98187 520 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 YOD1Q5VVQ6 348 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 MPZL3Q6UWV2 235 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 DPH6Q7L8W6 267 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 NPFFR2Q9Y5X5 522 aa10.18□□□□□ -0.78
TRAPPC11-206ENST00000509857 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 KDM2BQ8NHM5 1336 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 ARL4AP40617 200 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 INF2Q27J81 1249 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 NSMFQ6X4W1 530 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 SIRT2Q8IXJ6 389 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 PPIL6Q8IXY8 311 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 RNF114Q9Y508 228 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
TRAPPC11-206ENST00000509857 NPHS1O60500 1241 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 FAM153BP0C7A2 387 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 LTBRP36941 435 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 ZC3H12BQ5HYM0 836 aaKnown RBP10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 DIO2Q92813 273 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 MRFAP1L1Q96HT8 127 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 MTA3Q9BTC8 594 aa10.16□□□□□ -0.78
TRAPPC11-206ENST00000509857 KIF21BO75037 1637 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 A0A1W2PQ27 194 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 A0A1W2PQ64 194 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 A0A1W2PQC6 194 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 A0A1W2PQD8 194 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 HRKO00198 91 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 PRR23BQ6ZRT6 265 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 SCUBE1Q8IWY4 988 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 PIF1Q9H611 641 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 USP35Q9P2H5 1018 aa10.15□□□□□ -0.78
TRAPPC11-206ENST00000509857 OR14I1A6ND48 311 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 PPP1R11O60927 126 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 ADGRF1Q5T601 910 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 FOXB2Q5VYV0 432 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 RSPO2Q6UXX9 243 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 Q8N1Y9 231 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 THAP3Q8WTV1 239 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 DPF3Q92784 378 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
TRAPPC11-206ENST00000509857 YBX1P67809 324 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 NTRK3Q16288 839 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms