RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 CCDC103Q8IW40 242 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
CHD1-205ENST00000508756 KCNK12Q9HB15 430 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 PRODHO43272 600 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 CPP00450 1065 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 MMP19Q99542 508 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 DNAJC7Q99615 494 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 FAM53CQ9NYF3 392 aa10.8□□□□□ -0.68
CHD1-205ENST00000508756 TRAV20A0A0B4J274 112 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 C7orf72A4D263 438 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 DLX3O60479 287 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
CHD1-205ENST00000508756 CCDC144BQ3MJ40 725 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 SLC35F1Q5T1Q4 408 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 IRF2BP1Q8IU81 584 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 GULP1Q9UBP9 304 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 CDK11AQ9UQ88 783 aaPredicted RBP10.79□□□□□ -0.68
CHD1-205ENST00000508756 RWDD3Q9Y3V2 267 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 KDM2BQ8NHM5 1336 aa10.79□□□□□ -0.68
CHD1-205ENST00000508756 MEFVO15553 781 aaPredicted RBP10.78□□□□□ -0.68
CHD1-205ENST00000508756 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
CHD1-205ENST00000508756 FGFR1P11362 822 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 PABPC1P11940 636 aaKnown RBP10.78□□□□□ -0.68
CHD1-205ENST00000508756 MAP4K2Q12851 820 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 KCTD13Q8WZ19 329 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 PDLIM7Q9NR12 457 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 FBLN5Q9UBX5 448 aa10.78□□□□□ -0.68
CHD1-205ENST00000508756 NPHS1O60500 1241 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 ARL4AP40617 200 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 CORO7P57737 925 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 ACBD5Q5T8D3 534 aaPredicted RBP10.77□□□□□ -0.69
CHD1-205ENST00000508756 E4F1Q66K89 784 aaPredicted RBP10.77□□□□□ -0.69
CHD1-205ENST00000508756 OGFOD2Q6N063 350 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 NSMFQ6X4W1 530 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 TNFRSF12AQ9NP84 129 aa10.77□□□□□ -0.69
CHD1-205ENST00000508756 ERVFRD-1P60508 538 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 ZNF605Q86T29 641 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 ZBTB38Q8NAP3 1195 aaPredicted RBP10.76□□□□□ -0.69
CHD1-205ENST00000508756 DPF3Q92784 378 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 DIO2Q92813 273 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 EPB41L4BQ9H329 900 aa10.76□□□□□ -0.69
CHD1-205ENST00000508756 DCP1AQ9NPI6 582 aaPredicted RBP10.76□□□□□ -0.69
CHD1-205ENST00000508756 A0A1W2PQJ5 194 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 OR14I1A6ND48 311 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 LCP1P13796 627 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 KCNAB2Q13303 367 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 NFE2L2Q16236 605 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 BICRALQ6AI39 1079 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 DPH6Q7L8W6 267 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 BTG4Q9NY30 223 aa10.75□□□□□ -0.69
CHD1-205ENST00000508756 BLACEA4D250 179 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 NUDT19A8MXV4 375 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 LTBRP36941 435 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 TESK1Q15569 626 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 IQCEQ6IPM2 695 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 USP53Q70EK8 1073 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 LZTR1Q8N653 840 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 RCBTB1Q8NDN9 531 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 PIF1Q9H611 641 aa10.74□□□□□ -0.69
CHD1-205ENST00000508756 NTRK3Q16288 839 aa10.73□□□□□ -0.69
CHD1-205ENST00000508756 FAM209AQ5JX71 171 aa10.73□□□□□ -0.69
CHD1-205ENST00000508756 CDC6Q99741 560 aa10.73□□□□□ -0.69
CHD1-205ENST00000508756 MARCH2Q9P0N8 246 aa10.73□□□□□ -0.69
CHD1-205ENST00000508756 FBXL7Q9UJT9 491 aa10.73□□□□□ -0.69
CHD1-205ENST00000508756 FUCA1P04066 466 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 MPOP05164 745 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 MESP2Q0VG99 397 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
CHD1-205ENST00000508756 LILRB2Q8N423 598 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 MRFAP1L1Q96HT8 127 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 EXOC2Q96KP1 924 aa10.72□□□□□ -0.69
CHD1-205ENST00000508756 ZNF552Q9H707 407 aaPredicted RBP10.72□□□□□ -0.69
CHD1-205ENST00000508756 DBHP09172 617 aa10.71□□□□□ -0.69
CHD1-205ENST00000508756 TEX2Q8IWB9 1127 aa10.71□□□□□ -0.69
CHD1-205ENST00000508756 KLHL14Q9P2G3 628 aa10.71□□□□□ -0.69
CHD1-205ENST00000508756 TIMM13Q9Y5L4 95 aaPredicted RBP10.71□□□□□ -0.69
CHD1-205ENST00000508756 NPFFR2Q9Y5X5 522 aa10.71□□□□□ -0.69
CHD1-205ENST00000508756 TRBV23-1A0A0A0MS06 115 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 MYOCOSA0A1B0GUC4 107 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 BCL6P41182 706 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 RPL11P62913 178 aaKnown RBP10.7□□□□□ -0.7
CHD1-205ENST00000508756 RPTNQ6XPR3 784 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 FBXO15Q8NCQ5 510 aaPredicted RBP10.7□□□□□ -0.7
CHD1-205ENST00000508756 USP33Q8TEY7 942 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 PHF20Q9BVI0 1012 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 RXFP1Q9HBX9 757 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHD1-205ENST00000508756 PCDHA2Q9Y5H9 948 aa10.7□□□□□ -0.7
CHD1-205ENST00000508756 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms