RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 SOCS4Q8WXH5 440 aa8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 WASF1Q92558 559 aa8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 USP6NLQ92738 828 aa8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 INTS4Q96HW7 963 aaKnown RBP8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 MMP19Q99542 508 aa8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 A1CFQ9NQ94 594 aaKnown RBP8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 MAP3K20Q9NYL2 800 aaKnown RBP8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 CYP39A1Q9NYL5 469 aa8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
SPOCK1-205ENST00000508642 PIK3CDO00329 1044 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 DTNBO60941 627 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 ECM2O94769 699 aaPredicted RBP8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 CFBP00751 764 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 XBP1P17861 261 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 HOXD10P28358 340 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 ADORA2AP29274 412 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 PRMT2P55345 433 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 BAATQ14032 418 aaPredicted RBP8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 RNF207Q6ZRF8 634 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 OTOP1Q7RTM1 612 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 CCDC148Q8NFR7 591 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 CUL5Q93034 780 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 SHISA4Q96DD7 197 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 DDX11Q96FC9 970 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 AIFM3Q96NN9 605 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 NUDT12Q9BQG2 462 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 ALG1Q9BT22 464 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 ZMYND12Q9H0C1 365 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 PSTPIP2Q9H939 334 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 RIC8AQ9NPQ8 531 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 PRDM10Q9NQV6 1147 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 VPS54Q9P1Q0 977 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 SRRDQ9UH36 339 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 GJD2Q9UKL4 321 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 KIF3AQ9Y496 699 aa8.24□□□□□ -1.09
SPOCK1-205ENST00000508642 SMCO2A6NFE2 343 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 GCOM1H8Y6P7 765 aaPredicted RBP8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 MEIS2O14770 477 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 COBLO75128 1261 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 HOXC6P09630 235 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 POLR2MP0CAP2 368 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 GJB2P29033 226 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 RGS2P41220 211 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 ADCY7P51828 1080 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 MRPL12P52815 198 aaKnown RBP8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 RPS6P62753 249 aaKnown RBP8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 PRKCZQ05513 592 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 IRF5Q13568 498 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 BECN1Q14457 450 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 GALNT17Q6IS24 598 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 SLC30A10Q6XR72 485 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 DPP9Q86TI2 863 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 FAM133AQ8N9E0 248 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 FAM184AQ8NB25 1140 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 TBC1D5Q92609 795 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 APBA2Q99767 749 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 PHF20Q9BVI0 1012 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 GABRQQ9UN88 632 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 SMC3Q9UQE7 1217 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 DIS3Q9Y2L1 958 aaKnown RBP8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 TRIM17Q9Y577 477 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 KAT6AQ92794 2004 aa8.23□□□□□ -1.09
SPOCK1-205ENST00000508642 LOC102724159A0A0B4J2E5 919 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 PGK2P07205 417 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 CALML3P27482 149 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 GNA11P29992 359 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 HOXA13P31271 388 aaPredicted RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 CLK2P49760 499 aaKnown RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 FLT3LGP49771 235 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 NLRP5P59047 1200 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 TRIM29Q14134 588 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 PWP2Q15269 919 aaKnown RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 NPY5RQ15761 445 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 ZNF792Q3KQV3 632 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 MCTP2Q6DN12 878 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 USP17L6PQ6QN14 398 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 CTU1Q7Z7A3 348 aaKnown RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 ZNF467Q7Z7K2 595 aaPredicted RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 NPLOC4Q8TAT6 608 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 BICD2Q8TD16 824 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 SYTL5Q8TDW5 730 aaPredicted RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 MAML3Q96JK9 1138 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 FGD4Q96M96 766 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 GJB4Q9NTQ9 266 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 ADD3Q9UEY8 706 aaKnown RBP8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 PCDHA4Q9UN74 947 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 LOXHD1Q8IVV2 1947 aa8.22□□□□□ -1.09
SPOCK1-205ENST00000508642 ASTN1O14525 1302 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms