RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IFNL3Q8IZI9 196 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 OR2W6PQ8NHA6 318 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 FRS2Q8WU20 508 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 CCDC136Q96JN2 1154 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 HEXIM2Q96MH2 286 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 TBC1D32Q96NH3 1257 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 TTC1Q99614 292 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 MCMBPQ9BTE3 642 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 HDAC8Q9BY41 377 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPR62Q9BZJ7 368 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 TRIT1Q9H3H1 467 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPRC5CQ9NQ84 441 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPR27Q9NS67 375 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPATCH2Q9NW75 528 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 SLC5A4Q9NY91 659 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAN1Q9Y2M0 1017 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 NPFFR2Q9Y5X5 522 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 EID1Q9Y6B2 187 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 CAPN6Q9Y6Q1 641 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 PHLDB1Q86UU1 1377 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ASXL2Q76L83 1435 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ERCC6Q03468 1493 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 SSU72P8A0A1W2PR75 194 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 SHISA3A0PJX4 238 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PRR33A8MZF0 331 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM155AB1AL88 458 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 STXBP3O00186 592 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZEB2O60315 1214 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 KATNA1O75449 491 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 VAV1P15498 845 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 BMP8BP34820 402 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 CTSKP43235 329 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 EPHB1P54762 984 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPR85P60893 370 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 CYP27A1Q02318 531 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 STAT4Q14765 748 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 SART3Q15020 963 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 TESK1Q15569 626 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PIK3R6Q5UE93 754 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 CRTC3Q6UUV7 619 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZAR1Q86SH2 424 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 KSR1Q8IVT5 923 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 MFSD4AQ8N468 514 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 NPLOC4Q8TAT6 608 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PI4K2BQ8TCG2 481 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 TCTN2Q96GX1 697 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 FCRL3Q96P31 734 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 ORAI3Q9BRQ5 295 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PHF20Q9BVI0 1012 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 IFT22Q9H7X7 185 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 SAMD15Q9P1V8 674 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 THRAP3Q9Y2W1 955 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 PCDHA8Q9Y5H6 950 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 NESP48681 1621 aa4.34□□□□□ -1.71
TRAPPC11-205ENST00000506426 ATAD2BQ9ULI0 1458 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 TRBV23OR9-2A0A075B6M9 112 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 GPR39O43194 453 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 MED26O95402 600 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 SRFP11831 508 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 PLS3P13797 630 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 IFNGR1P15260 489 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 KCNA6P17658 529 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 ADMP35318 185 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 LTBRP36941 435 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 KCNAB2Q13303 367 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 TTF1Q15361 905 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 SEPT7Q16181 437 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 DUSP27Q5VZP5 1158 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 EEF1DP3Q658K8 133 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 RCSD1Q6JBY9 416 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 ARHGAP27Q6ZUM4 889 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 SPATS2Q86XZ4 545 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZC3H7AQ8IWR0 971 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 DIO2Q92813 273 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 GATA6Q92908 595 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 ALG1Q9BT22 464 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 SLC12A9Q9BXP2 914 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 PUS7LQ9H0K6 701 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 DUSP15Q9H1R2 295 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 PCMTD2Q9NV79 361 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 GEMIN8Q9NWZ8 242 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 STOML1Q9UBI4 398 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 RAXQ9Y2V3 346 aa4.33□□□□□ -1.72
TRAPPC11-205ENST00000506426 NCAPD3P42695 1498 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 HMX2A2RU54 273 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 RBAK-RBAKDNI3L0D1 243 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ARVCFO00192 962 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZNF205O95201 554 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 SYPP08247 313 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 GSTM1P09488 218 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 PYGMP11217 842 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 BPIP17213 487 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 PAMP19021 973 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ENDOUP21128 410 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 PCBP3P57721 371 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ITKQ08881 620 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 PAK1Q13153 545 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 LBX2Q6XYB7 198 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms