RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FBXO18Q8NFZ0 1043 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 FLRT1Q9NZU1 646 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PCDHA6Q9UN73 950 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PCDHA4Q9UN74 947 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PCDHA8Q9Y5H6 950 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 MCF2L2Q86YR7 1114 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 NPLOC4Q8TAT6 608 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PHKBQ93100 1093 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 LENG9Q96B70 501 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 APBA2Q99767 749 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 UPF3AQ9H1J1 476 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 IGLV3-22A0A075B6J6 115 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PKN2Q16513 984 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 WASF1Q92558 559 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 MAML3Q96JK9 1138 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 FOXP1Q9H334 677 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 RNF146Q9NTX7 359 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PTPN22Q9Y2R2 807 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 RGS20O76081 388 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 PCNX4Q63HM2 1172 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 CLEC17AQ6ZS10 378 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 OTOP1Q7RTM1 612 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 CMTR1Q8N1G2 835 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCPG1Q9ULG6 757 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 FCGRTP55899 365 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCT2P78371 535 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 EFCC1Q9HA90 598 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 PXMP2Q9NR77 195 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 UBIAD1Q9Y5Z9 338 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 CYBAP13498 195 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 C4orf32Q8N8J7 132 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 NUP133Q8WUM0 1156 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 PCDHA1Q9Y5I3 950 aa9.55□□□□□ -0.88
CDC42SE2-208ENST00000505065 SNAI1O95863 264 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 ZNF865P0CJ78 1059 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 TAL1P17542 331 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 ALDH5A1P51649 535 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 Q4G0T1 1027 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC83Q8IWF9 413 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 GABRQQ9UN88 632 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CTAGE5O15320 804 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 ADORA2AP29274 412 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 SNAP25P60880 206 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC62Q6P9F0 684 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC144CPQ8IYA2 1237 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC148Q8NFR7 591 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 INPP4AQ96PE3 977 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 TRPA1O75762 1119 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 RPS6P62753 249 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 PGM5Q15124 567 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 PPP4R3AQ6IN85 833 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 TBC1D5Q92609 795 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 COA7Q96BR5 231 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 PAK6Q9NQU5 681 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 Q9Y3F1 56 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 MRPS9P82933 396 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 RESTQ13127 1097 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 UBE2Q1Q7Z7E8 422 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 TRPV1Q8NER1 839 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC12Q8WUD4 166 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 MMP19Q99542 508 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
CDC42SE2-208ENST00000505065 FOSP01100 380 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 FCER1AP12319 257 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 CD99L2Q8TCZ2 262 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 SENP7Q9BQF6 1050 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 SLC26A6Q9BXS9 759 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 KIF28PB7ZC32 967 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 USP11P51784 963 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCSAPQ6IQ19 270 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 RAB11FIP4Q86YS3 637 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 CUL5Q93034 780 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 ORC3Q9UBD5 711 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 MTMR6Q9Y217 621 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 MYH9P35579 1960 aaKnown RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 CALML3P27482 149 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 GJB2P29033 226 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 RGS2P41220 211 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 BICD2Q8TD16 824 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 TRIB2Q92519 343 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 GPKOWQ92917 476 aaPredicted RBP eCLIP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 NFASCO94856 1347 aa9.53□□□□□ -0.88
CDC42SE2-208ENST00000505065 BRD1O95696 1058 aa9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCDC174Q6PII3 467 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms