RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 CHMP4BP1P59074 171 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 SBK1Q52WX2 424 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 MUM1L1Q5H9M0 696 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 KCTD1Q719H9 257 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 FAM160B2Q86V87 743 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 RPAP2Q8IXW5 612 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 APPBP2Q92624 585 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 OSBP2Q969R2 916 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 VWCEQ96DN2 955 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 PHF12Q96QT6 1004 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 FTOQ9C0B1 505 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 MTMR4Q9NYA4 1195 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 ZNF536O15090 1300 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 SCN5AQ14524 2016 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 M0R2C6 588 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 PFKMP08237 780 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 SUPT20HL2P0C7V6 817 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 MCCP23508 829 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 CCDC96Q2M329 555 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 IQSEC1Q6DN90 963 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 TAPT1Q6NXT6 567 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 OR6J1Q8NGC5 347 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 SLC9A7Q96T83 725 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 GPHNQ9NQX3 736 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 CYP39A1Q9NYL5 469 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 COG5Q9UP83 839 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 NOD1Q9Y239 953 aa8.19□□□□□ -1.1
NPIPB3-203ENST00000504841 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 KIF28PB7ZC32 967 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TLL1O43897 1013 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 GABBR2O75899 941 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 FDX1P10109 184 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 KCNJ6P48051 423 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 PURAQ00577 322 aaKnown RBP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TFAP4Q01664 338 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TAP1Q03518 808 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 GRB10Q13322 594 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TKFCQ3LXA3 575 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 GIMAP6Q6P9H5 292 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TMCO2Q7Z6W1 182 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 HERC6Q8IVU3 1022 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 KBTBD3Q8NAB2 608 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 NEDD1Q8NHV4 660 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 GDPD5Q8WTR4 605 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 STAG1Q8WVM7 1258 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 HLA-CQ95604 372 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 MKL1Q969V6 931 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 GMCL1Q96IK5 515 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 MTG1Q9BT17 334 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 WDR11Q9BZH6 1224 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 LRRCC1Q9C099 1032 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 POLR3EQ9NVU0 708 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 MTUS1Q9ULD2 1270 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 DDX19BQ9UMR2 479 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 SYNPO2Q9UMS6 1093 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 STX8Q9UNK0 236 aa8.18□□□□□ -1.1
NPIPB3-203ENST00000504841 TANC1Q9C0D5 1861 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 PTPDC1A2A3K4 754 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 LCHNA4D1U4 455 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 TSPY2A6NKD2 308 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 RBAK-RBAKDNI3L0D1 243 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 NMT2O60551 498 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 SLC3A2P08195 630 aaKnown RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 GNAT2P19087 354 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 CALML3P27482 149 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 CPT1AP50416 773 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 ALDH5A1P51649 535 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 PDE4BQ07343 736 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 BAATQ14032 418 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 NBPF20Q3BBV1 942 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 DUSP28Q4G0W2 176 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 SLC30A10Q6XR72 485 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 IFNL3Q8IZI9 196 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 NAPBQ9H115 298 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 ECHDC1Q9NTX5 307 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 ADD3Q9UEY8 706 aaKnown RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 Q9Y3F1 56 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 FRMPD2Q68DX3 1309 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 PLIN4Q96Q06 1357 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 LCTP09848 1927 aa8.17□□□□□ -1.1
NPIPB3-203ENST00000504841 NCOR1O75376 2440 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms