RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 ICAM1P05362 532 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 POU3F3P20264 500 aaPredicted RBP13.03□□□□□ -0.32
SND1-215ENST00000492772 PTGS1P23219 599 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 TMEM67Q5HYA8 995 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
SND1-215ENST00000492772 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
SND1-215ENST00000492772 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 RAD50Q92878 1312 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 SCN10AQ9Y5Y9 1956 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 ERC2O15083 957 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 BMP1P13497 986 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 MYOGP15173 224 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 ALDH5A1P51649 535 aaPredicted RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 TTLL4Q14679 1199 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 VWCEQ96DN2 955 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 TRMT13Q9NUP7 481 aaKnown RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
SND1-215ENST00000492772 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.33
SND1-215ENST00000492772 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
SND1-215ENST00000492772 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
SND1-215ENST00000492772 CA3P07451 260 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 MYL3P08590 195 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 CYP2C9P11712 490 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 SNAP25P60880 206 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 TFF2Q03403 129 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 TMEM63BQ5T3F8 832 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 DEFB128Q7Z7B8 93 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
SND1-215ENST00000492772 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 PNMA2Q9UL42 364 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
SND1-215ENST00000492772 NKRFO15226 690 aaKnown RBP eCLIP13□□□□□ -0.33
SND1-215ENST00000492772 KPNA6O60684 536 aa13□□□□□ -0.33
SND1-215ENST00000492772 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
SND1-215ENST00000492772 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
SND1-215ENST00000492772 PPP2R5BQ15173 497 aa13□□□□□ -0.33
SND1-215ENST00000492772 FAM47CQ5HY64 1035 aa13□□□□□ -0.33
SND1-215ENST00000492772 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
SND1-215ENST00000492772 BTNL9Q6UXG8 535 aa13□□□□□ -0.33
SND1-215ENST00000492772 RASGRP2Q7LDG7 609 aa13□□□□□ -0.33
SND1-215ENST00000492772 NECAB3Q96P71 396 aaPredicted RBP13□□□□□ -0.33
SND1-215ENST00000492772 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
SND1-215ENST00000492772 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 NFIBO00712 420 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 ORC4O43929 436 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
SND1-215ENST00000492772 NMT2O60551 498 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 BAIAP3O94812 1187 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 NOVP48745 357 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 KCNQ1P51787 676 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 PDE4DQ08499 809 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 BFSP2Q13515 415 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 MIER1Q8N108 512 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 PI4K2BQ8TCG2 481 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 PURBQ96QR8 312 aaKnown RBP12.99□□□□□ -0.33
SND1-215ENST00000492772 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 MTMR7Q9Y216 660 aa12.99□□□□□ -0.33
SND1-215ENST00000492772 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
SND1-215ENST00000492772 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 B4DLN1 442 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
SND1-215ENST00000492772 NBPF20Q3BBV1 942 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
SND1-215ENST00000492772 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
SND1-215ENST00000492772 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 A6NJR5 290 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 RFXAPO00287 272 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 FOXP2O15409 715 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 IQCF3P0C7M6 154 aa12.97□□□□□ -0.33
SND1-215ENST00000492772 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
SND1-215ENST00000492772 EDNRBP24530 442 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms