RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ALDH8A1Q9H2A2 487 aaPredicted RBP10.09□□□□□ -0.79
HPS4-215ENST00000491142 SLC28A3Q9HAS3 691 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 ZSWIM6Q9HCJ5 1215 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
HPS4-215ENST00000491142 UMODL1Q5DID0 1318 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 A0A0U1RQG5 324 aaPredicted RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 FSD2A1L4K1 749 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 USP17L12C9JPN9 530 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 USP17L21D6R901 530 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 GOLIM4O00461 696 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 CTAGE5O15320 804 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 MYOGP15173 224 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 COPB2P35606 906 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 KCNQ1P51787 676 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 GJA9P57773 515 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 TTF1Q15361 905 aaPredicted RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 C12orf60Q5U649 245 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 VPS53Q5VIR6 699 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 OTOP2Q7RTS6 562 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 PCSK9Q8NBP7 692 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 FAM227BQ96M60 508 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 FGD4Q96M96 766 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 DNAJC2Q99543 621 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 C1QTNF1Q9BXJ1 281 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 UPF3AQ9H1J1 476 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 KANSL2Q9H9L4 492 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 ZDHHC9Q9Y397 364 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
HPS4-215ENST00000491142 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
HPS4-215ENST00000491142 TCHHQ07283 1943 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 NCOR1O75376 2440 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 TRANK1O15050 2925 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 TLR3O15455 904 aaKnown RBP10.07□□□□□ -0.8
HPS4-215ENST00000491142 MBD4O95243 580 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 BRD1O95696 1058 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 CHGBP05060 677 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 AK2P54819 239 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 CCL23P55773 120 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 BEX3Q00994 111 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 RNF20Q5VTR2 975 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 KBTBD3Q8NAB2 608 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 ZSCAN31Q96LW9 406 aaPredicted RBP10.07□□□□□ -0.8
HPS4-215ENST00000491142 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
HPS4-215ENST00000491142 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 ABHD16BQ9H3Z7 469 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 SPC25Q9HBM1 224 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 ATP8A2Q9NTI2 1148 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
HPS4-215ENST00000491142 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
HPS4-215ENST00000491142 RFXAPO00287 272 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 SLC27A2O14975 620 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
HPS4-215ENST00000491142 PTGS1P23219 599 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 PSMA5P28066 241 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 KLHL40Q2TBA0 621 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 SLC43A3Q8NBI5 491 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 MTIF3Q9H2K0 278 aaKnown RBP10.06□□□□□ -0.8
HPS4-215ENST00000491142 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
HPS4-215ENST00000491142 SH2B1Q9NRF2 756 aaPredicted RBP10.06□□□□□ -0.8
HPS4-215ENST00000491142 ASTN1O14525 1302 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 GRIN2DO15399 1336 aa10.06□□□□□ -0.8
HPS4-215ENST00000491142 MYH15Q9Y2K3 1946 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 F5H6K3 240 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 ADD2P35612 726 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 NKX3-2P78367 333 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 KLRC3Q07444 240 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 PKP1Q13835 747 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
HPS4-215ENST00000491142 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 CTR9Q6PD62 1173 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 CCDC144CPQ8IYA2 1237 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 ANKRD35Q8N283 1001 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
HPS4-215ENST00000491142 JAKMIP1Q96N16 626 aaKnown RBP10.05□□□□□ -0.8
HPS4-215ENST00000491142 NOC4LQ9BVI4 516 aaKnown RBP10.05□□□□□ -0.8
HPS4-215ENST00000491142 TRPV6Q9H1D0 765 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 WNT8AQ9H1J5 351 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 HELLSQ9NRZ9 838 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 PDRG1Q9NUG6 133 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms