RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CALML3P27482 149 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 MAPK4P31152 587 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
TFF3-203ENST00000489676 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 PKP1Q13835 747 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 UBE2SQ16763 222 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
TFF3-203ENST00000489676 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 CUL5Q93034 780 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 CYP39A1Q9NYL5 469 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 MTMR6Q9Y217 621 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 PFASO15067 1338 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 PLXNA1Q9UIW2 1896 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
TFF3-203ENST00000489676 CASP8AP2Q9UKL3 1982 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 STX6O43752 255 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 PTPREP23469 700 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 GNA11P29992 359 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 NLRP5P59047 1200 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 NR5A1Q13285 461 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 TRIM29Q14134 588 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 GRB14Q14449 540 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
TFF3-203ENST00000489676 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
TFF3-203ENST00000489676 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
TFF3-203ENST00000489676 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 FGD4Q96M96 766 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 ARHGAP39Q9C0H5 1083 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
TFF3-203ENST00000489676 ASTN1O14525 1302 aa12.51□□□□□ -0.41
TFF3-203ENST00000489676 MYH7BA7E2Y1 1941 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 GCOM1H8Y6P7 765 aaPredicted RBP12.5□□□□□ -0.41
TFF3-203ENST00000489676 STRNO43815 780 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 CFBP00751 764 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 POLR2MP0CAP2 368 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
TFF3-203ENST00000489676 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
TFF3-203ENST00000489676 KRT2P35908 639 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
TFF3-203ENST00000489676 LBX1P52954 281 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 SP3Q02447 781 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
TFF3-203ENST00000489676 MORN1Q5T089 497 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 NSMFQ6X4W1 530 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 USP6NLQ92738 828 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 TMEM260Q9NX78 707 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
TFF3-203ENST00000489676 VPS37CA5D8V6 355 aaPredicted RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 SLC15A5A6NIM6 579 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 BRD1O95696 1058 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 FCER1AP12319 257 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 ADORA2AP29274 412 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 MLLT1Q03111 559 aaPredicted RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 RESTQ13127 1097 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 KCTD2Q14681 263 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 EARS2Q5JPH6 523 aaKnown RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 ANKRD35Q8N283 1001 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 MMP19Q99542 508 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
TFF3-203ENST00000489676 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
TFF3-203ENST00000489676 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 H3BQV1 296 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 EDIL3O43854 480 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 COBLO75128 1261 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 IGHA2P01877 340 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 HOXC6P09630 235 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
TFF3-203ENST00000489676 SREBF1P36956 1147 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 PSMC4P43686 418 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 FCGRTP55899 365 aa12.48□□□□□ -0.41
TFF3-203ENST00000489676 CNTN2Q02246 1040 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms