RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TRPM7Q96QT4 1865 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 MAPK4P31152 587 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 HSD17B4P51659 736 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDLBP-242ENST00000488013 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 CLEC4DQ8WXI8 215 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 MOV10L1Q9BXT6 1211 aaKnown RBP12.62□□□□□ -0.39
HDLBP-242ENST00000488013 BTBD7Q9P203 1132 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
HDLBP-242ENST00000488013 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 M0R2N6 131 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 CFBP00751 764 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 FCER1AP12319 257 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 ERCC3P19447 782 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
HDLBP-242ENST00000488013 FOSBP53539 338 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 RESTQ13127 1097 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 KCTD2Q14681 263 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 PWP2Q15269 919 aaKnown RBP12.61□□□□□ -0.39
HDLBP-242ENST00000488013 NPY5RQ15761 445 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 NCAPG2Q86XI2 1143 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 GJB4Q9NTQ9 266 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
HDLBP-242ENST00000488013 PCDHA6Q9UN73 950 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 PCDHA8Q9Y5H6 950 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 OTOFQ9HC10 1997 aa12.61□□□□□ -0.39
HDLBP-242ENST00000488013 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 MEIS2O14770 477 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 CNMDO75829 334 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 BCRP11274 1271 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
HDLBP-242ENST00000488013 VEGFBP49765 207 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 USP11P51784 963 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 KRT85P78386 507 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 MAP2K1Q02750 393 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-242ENST00000488013 PKP1Q13835 747 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 C17orf99Q6UX52 265 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-242ENST00000488013 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
HDLBP-242ENST00000488013 NFIBO00712 420 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 DTNBO60941 627 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
HDLBP-242ENST00000488013 NR5A1Q13285 461 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
HDLBP-242ENST00000488013 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 USP17L6PQ6QN14 398 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 MOXD1Q6UVY6 613 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 PIK3AP1Q6ZUJ8 805 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-242ENST00000488013 NSUN6Q8TEA1 469 aaKnown RBP12.59□□□□□ -0.39
HDLBP-242ENST00000488013 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 BEGAINQ9BUH8 593 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-242ENST00000488013 RIPK3Q9Y572 518 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
HDLBP-242ENST00000488013 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.39
HDLBP-242ENST00000488013 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 LAD1O00515 517 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 OPLAHO14841 1288 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 AOC2O75106 756 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 STAM2O75886 525 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 SREBF1P36956 1147 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-242ENST00000488013 CRHR2Q13324 411 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 BAATQ14032 418 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-242ENST00000488013 KIF22Q14807 665 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 Q3C1V9 767 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 MUM1L1Q5H9M0 696 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 TNPO1Q92973 898 aaKnown RBP12.58□□□□□ -0.4
HDLBP-242ENST00000488013 MMP19Q99542 508 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
HDLBP-242ENST00000488013 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
HDLBP-242ENST00000488013 CYP39A1Q9NYL5 469 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms