RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 TSPY3P0CV98 308 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 TSPY8P0CW00 308 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 MCCP23508 829 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
HOXA9-204ENST00000487384 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 IQSEC1Q6DN90 963 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 NSMFQ6X4W1 530 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 KCTD1Q719H9 257 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 SPRED2Q7Z698 418 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 GMCL1P1Q8NEA9 526 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 TNKSO95271 1327 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 RBAK-RBAKDNI3L0D1 243 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 M0R2C6 588 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 GPAA1O43292 621 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 SLC1A4P43007 532 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 TFAP4Q01664 338 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 FAM47CQ5HY64 1035 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 STAG1Q8WVM7 1258 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
HOXA9-204ENST00000487384 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 CYP39A1Q9NYL5 469 aa9.97□□□□□ -0.81
HOXA9-204ENST00000487384 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.81
HOXA9-204ENST00000487384 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
HOXA9-204ENST00000487384 TLL1O43897 1013 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 PFKMP08237 780 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 SUPT20HL2P0C7V6 817 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 FDX1P10109 184 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 ACTN1P12814 892 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 POU3F3P20264 500 aaPredicted RBP9.96□□□□□ -0.82
HOXA9-204ENST00000487384 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 TAP1Q03518 808 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 TKFCQ3LXA3 575 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 TMEM31Q5JXX7 168 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 FAM160B2Q86V87 743 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 KBTBD3Q8NAB2 608 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 NEDD1Q8NHV4 660 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 APPBP2Q92624 585 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 HLA-CQ95604 372 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 SEZ6LQ9BYH1 1024 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 WDR11Q9BZH6 1224 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 LRRCC1Q9C099 1032 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 FTOQ9C0B1 505 aaKnown RBP eCLIP9.96□□□□□ -0.82
HOXA9-204ENST00000487384 VTA1Q9NP79 307 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 CCPG1Q9ULG6 757 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 COG5Q9UP83 839 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 Q9Y3F1 56 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 MYO7AQ13402 2215 aa9.96□□□□□ -0.82
HOXA9-204ENST00000487384 NMT2O60551 498 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 PURAQ00577 322 aaKnown RBP9.95□□□□□ -0.82
HOXA9-204ENST00000487384 PDE4BQ07343 736 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 GRB10Q13322 594 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 DUSP28Q4G0W2 176 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 TMCO2Q7Z6W1 182 aaPredicted RBP9.95□□□□□ -0.82
HOXA9-204ENST00000487384 HERC6Q8IVU3 1022 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 OR6J1Q8NGC5 347 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 SLC9A7Q96T83 725 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
HOXA9-204ENST00000487384 C11orf16Q9NQ32 467 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
HOXA9-204ENST00000487384 ECHDC1Q9NTX5 307 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 DDX19BQ9UMR2 479 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 SYNPO2Q9UMS6 1093 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 STX8Q9UNK0 236 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
HOXA9-204ENST00000487384 MYH6P13533 1939 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 SIP14410 1827 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 PTPDC1A2A3K4 754 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 LCHNA4D1U4 455 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 KIF28PB7ZC32 967 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
HOXA9-204ENST00000487384 IQCF3P0C7M6 154 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 GNAT2P19087 354 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 SLC16A2P36021 539 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 CPT1AP50416 773 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 ALDH5A1P51649 535 aaPredicted RBP9.94□□□□□ -0.82
HOXA9-204ENST00000487384 BAATQ14032 418 aaPredicted RBP9.94□□□□□ -0.82
HOXA9-204ENST00000487384 CCDC96Q2M329 555 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 RETREG2Q8NC44 543 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 GDPD5Q8WTR4 605 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 COPS5Q92905 334 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 MTG1Q9BT17 334 aaPredicted RBP9.94□□□□□ -0.82
HOXA9-204ENST00000487384 CD320Q9NPF0 282 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 MTUS1Q9ULD2 1270 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 KIAA1217Q5T5P2 1943 aa9.94□□□□□ -0.82
HOXA9-204ENST00000487384 NFIBO00712 420 aa9.93□□□□□ -0.82
HOXA9-204ENST00000487384 LPXNO60711 386 aa9.93□□□□□ -0.82
HOXA9-204ENST00000487384 SLC3A2P08195 630 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms