RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NPHP3-ACAD11A0A0J9YXS1 232 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 TCRBV16S1A1N1A0A5B0 115 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 MSCO60682 206 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 GUCY1A3Q02108 690 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 ZNF460Q14592 562 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 TESK1Q15569 626 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 INF2Q27J81 1249 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 RSPO2Q6UXX9 243 aaPredicted RBP6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 WAPLQ7Z5K2 1190 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 RNF180Q86T96 592 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 IFNL3Q8IZI9 196 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 NAT16Q8N8M0 369 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 RCBTB1Q8NDN9 531 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 MMP19Q99542 508 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 VAV3Q9UKW4 847 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 MAPRE3Q9UPY8 281 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
PRPF38A-203ENST00000487160 ASLP04424 464 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 FURINP09958 794 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 POU3F3P20264 500 aaPredicted RBP6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 ENDOUP21128 410 aaKnown RBP6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 SOX5P35711 763 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 IGFALSP35858 605 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 CD96P40200 585 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 GPR85P60893 370 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 BNIP3Q12983 259 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 KCNAB2Q13303 367 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 LAPTM5Q13571 262 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 CT47A1Q5JQC4 288 aaPredicted RBP6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 PRSS36Q5K4E3 855 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 MBLAC2Q68D91 279 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 IQCEQ6IPM2 695 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 RPUSD2Q8IZ73 545 aaKnown RBP6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 TMEM52Q8NDY8 209 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 ZFYVE21Q9BQ24 234 aa6.97□□□□□ -1.29
PRPF38A-203ENST00000487160 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 NEK4P51957 841 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 PCBP1Q15365 356 aaKnown RBP eCLIP6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 MSMPQ1L6U9 139 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 MTDHQ86UE4 582 aaKnown RBP6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 JAMLQ86YT9 394 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 LEO1Q8WVC0 666 aaPredicted RBP6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 SEMA6BQ9H3T3 888 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 ERVK13-1Q9NX77 482 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
PRPF38A-203ENST00000487160 TRBV23OR9-2A0A075B6M9 112 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 KPNA6O60684 536 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 JMJD7P0C870 316 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 KCNA6P17658 529 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 NAT1P18440 290 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 NFKB2Q00653 900 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 IKZF1Q13422 519 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 LBX2Q6XYB7 198 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 PPM1KQ8N3J5 372 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 CARS2Q9HA77 564 aaKnown RBP6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 BSDC1Q9NW68 430 aaPredicted RBP6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
PRPF38A-203ENST00000487160 APPP05067 770 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 POU3F2P20265 443 aaPredicted RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 FLT3P36888 993 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 CEBPAP49715 358 aaPredicted RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 CFAP100Q494V2 611 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 ABHD17CQ6PCB6 329 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 CYP2R1Q6VVX0 501 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 UBE2R2Q712K3 238 aaPredicted RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 ATP8A1Q9Y2Q0 1164 aa6.94□□□□□ -1.3
PRPF38A-203ENST00000487160 C7orf72A4D263 438 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 B4E1Z4 1266 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 ARVCFO00192 962 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 CD8BP10966 210 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 GRIK1P39086 918 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 EVA1CP58658 441 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 HLA-DQA1Q5Y7H0 255 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 ZCCHC8Q6NZY4 707 aaKnown RBP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 DDX42Q86XP3 938 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 PCDH19Q8TAB3 1148 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 BCL7CQ8WUZ0 217 aaPredicted RBP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 SYTL4Q96C24 671 aaPredicted RBP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 ALG1Q9BT22 464 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 EBF1Q9UH73 591 aa6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 TIMM13Q9Y5L4 95 aaPredicted RBP6.93□□□□□ -1.3
PRPF38A-203ENST00000487160 MYO1BO43795 1136 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 COBLO75128 1261 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 IGHA1P01876 353 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 BCL6P41182 706 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 CDKN1CP49918 316 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms