RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 KBTBD13C9JR72 458 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 SEPT4O43236 478 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 ZBTB43O43298 467 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 CFBP00751 764 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 RARBP10826 455 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 AKR1A1P14550 325 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 GNAQP50148 359 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 TRAF1Q13077 416 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 TSGA10IPQ3SY00 556 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 APOA5Q6Q788 366 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 FAM133AQ8N9E0 248 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 TRPV1Q8NER1 839 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
NEK4-204ENST00000487068 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
NEK4-204ENST00000487068 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 PLEKHA8P1O95397 391 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 ALDH5A1P51649 535 aaPredicted RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 RTN1Q16799 776 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 Q6ZUG5 572 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 EEPD1Q7L9B9 569 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 NECAB2Q7Z6G3 386 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 ANKLE1Q8NAG6 615 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 BRF1Q92994 677 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 LENG1Q96BZ8 264 aaPredicted RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.52
NEK4-204ENST00000487068 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 XPNPEP3Q9NQH7 507 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 NRBP1Q9UHY1 535 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
NEK4-204ENST00000487068 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 B4DLN1 442 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEK4-204ENST00000487068 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
NEK4-204ENST00000487068 PDE4DQ08499 809 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 ACVR2BQ13705 512 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 GJC2Q5T442 439 aaPredicted RBP11.82□□□□□ -0.52
NEK4-204ENST00000487068 MAMDC4Q6UXC1 1216 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 FANCBQ8NB91 859 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 CLEC4DQ8WXI8 215 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 FGD4Q96M96 766 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 PURBQ96QR8 312 aaKnown RBP11.82□□□□□ -0.52
NEK4-204ENST00000487068 LZTS2Q9BRK4 669 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 C11orf49Q9H6J7 331 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
NEK4-204ENST00000487068 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
NEK4-204ENST00000487068 CYTH3O43739 400 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 SNAI1O95863 264 aaPredicted RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 LHX8Q68G74 356 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 ARRDC4Q8NCT1 418 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 KCNB2Q92953 911 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 UPF3BQ9BZI7 483 aaKnown RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
NEK4-204ENST00000487068 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
NEK4-204ENST00000487068 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 PGK1P00558 417 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 C6orf222P0C671 652 aaPredicted RBP11.8□□□□□ -0.52
NEK4-204ENST00000487068 EIF2AK2P19525 551 aaKnown RBP11.8□□□□□ -0.52
NEK4-204ENST00000487068 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
NEK4-204ENST00000487068 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
NEK4-204ENST00000487068 ARHGEF16Q5VV41 709 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 RNF180Q86T96 592 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
NEK4-204ENST00000487068 DNERQ8NFT8 737 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 CUL5Q93034 780 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
NEK4-204ENST00000487068 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms