RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SLC43A3Q8NBI5 491 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 NFIBO00712 420 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAF4-206ENST00000485790 CD4P01730 458 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 FGBP02675 491 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 CSF2RAP15509 400 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 PSRC1Q6PGN9 363 aaPredicted RBP16.11■□□□□ 0.17
SCAF4-206ENST00000485790 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 PURBQ96QR8 312 aaKnown RBP16.11■□□□□ 0.17
SCAF4-206ENST00000485790 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
SCAF4-206ENST00000485790 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■□□□□ 11.2
SCAF4-206ENST00000485790 ZKSCAN3Q9BRR0 538 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 PPP1R12CQ9BZL4 782 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 KRT23Q9C075 422 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 RAD50Q92878 1312 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 MYH7P12883 1935 aa16.11■□□□□ 0.17
SCAF4-206ENST00000485790 KDM4AO75164 1064 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
SCAF4-206ENST00000485790 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCAF4-206ENST00000485790 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 SCFD2Q8WU76 684 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 UBAC1Q9BSL1 405 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 DSCC1Q9BVC3 393 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 IL23AQ9NPF7 189 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 ASTN1O14525 1302 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 COL6A3P12111 3177 aa16.1■□□□□ 0.17
SCAF4-206ENST00000485790 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-206ENST00000485790 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
SCAF4-206ENST00000485790 DHX16O60231 1041 aaKnown RBP16.09■□□□□ 0.17
SCAF4-206ENST00000485790 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 CYP2C18P33260 490 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 ZNF365Q70YC5 407 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 MAFAQ8NHW3 353 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-206ENST00000485790 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-206ENST00000485790 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 TRPV6Q9H1D0 765 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
SCAF4-206ENST00000485790 MYL3P08590 195 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 TXNP10599 105 aaKnown RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 FOSL2P15408 326 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 TRDNQ13061 729 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 TTLL4Q14679 1199 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 USH1GQ495M9 461 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 OR6J1Q8NGC5 347 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 MYLIPQ8WY64 445 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 TIFAQ96CG3 184 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 TTYH1Q9H313 450 aaPredicted RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 ZNF576Q9H609 170 aa16.08■□□□□ 0.16
SCAF4-206ENST00000485790 MRPL11Q9Y3B7 192 aaKnown RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 LAMA2P24043 3122 aaKnown RBP16.08■□□□□ 0.16
SCAF4-206ENST00000485790 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
SCAF4-206ENST00000485790 ACRP10323 421 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 DNAJB2P25686 324 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 PSMC6P62333 389 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 TRAF1Q13077 416 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 NSUN6Q8TEA1 469 aaKnown RBP16.07■□□□□ 0.16
SCAF4-206ENST00000485790 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 ALDH8A1Q9H2A2 487 aaPredicted RBP16.07■□□□□ 0.16
SCAF4-206ENST00000485790 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 ABCB11O95342 1321 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
SCAF4-206ENST00000485790 COL11A1P12107 1806 aaPredicted RBP16.06■□□□□ 0.16
SCAF4-206ENST00000485790 GRIN2DO15399 1336 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 NEDD4P46934 1319 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 B4E1Z4 1266 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 CCL23P55773 120 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 RAB30Q15771 203 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 STXBP2Q15833 593 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
SCAF4-206ENST00000485790 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 HERVK_113Q902F9 699 aa16.06■□□□□ 0.16
SCAF4-206ENST00000485790 A6NJR5 290 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 B4GALT4O60513 344 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 EDNRBP24530 442 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
SCAF4-206ENST00000485790 GRIN2CQ14957 1233 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 CDC37Q16543 378 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-206ENST00000485790 FAM47CQ5HY64 1035 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms