RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 HTRA3P83110 453 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 FMR1Q06787 632 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 NFIAQ12857 509 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 SUZ12Q15022 739 aaKnown RBP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 PKN2Q16513 984 aaKnown RBP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 OTUD7BQ6GQQ9 843 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 KBTBD3Q8NAB2 608 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 RETREG2Q8NC44 543 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 TMEM39BQ9GZU3 492 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 CCDC8Q9H0W5 538 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 EFCC1Q9HA90 598 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 VEZTQ9HBM0 779 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 ATP8A2Q9NTI2 1148 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 SYNPO2Q9UMS6 1093 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 CSADQ9Y600 493 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 TAF1P21675 1872 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 TCP10L2B9ZVM9 353 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 ASNSP08243 561 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 HSPA8P11142 646 aaKnown RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 CETPP11597 493 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 PDE6AP16499 860 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 GNAT2P19087 354 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 GRNP28799 593 aaKnown RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 INPP5BP32019 993 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 ADD2P35612 726 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 ARSDP51689 593 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 KIF23Q02241 960 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 GABPAQ06546 454 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 SNAPC2Q13487 334 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 VGLL4Q14135 290 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 COX20Q5RI15 118 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 SLC9C2Q5TAH2 1124 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 ERICH6BQ5W0A0 696 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 C16orf46Q6P387 395 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 PI16Q6UXB8 463 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 LINC00114Q6XXX2 140 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 FASTKD5Q7L8L6 764 aaKnown RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 TTC6Q86TZ1 520 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 SCYL3Q8IZE3 742 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 KCTD17Q8N5Z5 321 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 BHMTQ93088 406 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 WNK4Q96J92 1243 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 MKNK1Q9BUB5 465 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 WDR18Q9BV38 432 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 PIH1D3Q9NQM4 214 aaKnown RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 PAG1Q9NWQ8 432 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 RAI14Q9P0K7 980 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 ANGEL1Q9UNK9 670 aaKnown RBP5.9□□□□□ -1.46
PTCD3-213ENST00000480102 JAG2Q9Y219 1238 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 PCDHAC2Q9Y5I4 1007 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.46
PTCD3-213ENST00000480102 CCDC88AQ3V6T2 1871 aa5.9□□□□□ -1.47
PTCD3-213ENST00000480102 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 PIK3R2O00459 728 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 GNB5O14775 395 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 IDH1O75874 414 aaKnown RBP5.89□□□□□ -1.47
PTCD3-213ENST00000480102 MICAL2O94851 1124 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 MX1P20591 662 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 ALAS2P22557 587 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 NUCB1Q02818 461 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 SBK1Q52WX2 424 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 TATDN1Q6P1N9 297 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 ANKRD23Q86SG2 305 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 TEX11Q8IYF3 940 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 PI4K2BQ8TCG2 481 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 WRNIP1Q96S55 665 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 CRNKL1Q9BZJ0 848 aaKnown RBP5.89□□□□□ -1.47
PTCD3-213ENST00000480102 GSX2Q9BZM3 304 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF408Q9H9D4 720 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 IL1RAPL2Q9NP60 686 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 DDX4Q9NQI0 724 aaKnown RBP5.89□□□□□ -1.47
PTCD3-213ENST00000480102 RNF186Q9NXI6 227 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 USTQ9Y2C2 406 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 ZMYM6O95789 1325 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 FLT1P17948 1338 aa5.89□□□□□ -1.47
PTCD3-213ENST00000480102 A0A0G2JLL6 359 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 FOXN1O15353 648 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 AOC2O75106 756 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CYP7A1P22680 504 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 HOXA7P31268 230 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CAP2P40123 477 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 ADH7P40394 386 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 PRMT2P55345 433 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CCINQ13939 588 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 PRRT2Q7Z6L0 340 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 ADGRA1Q86SQ6 560 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 TREML1Q86YW5 311 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 MAGEB6Q8N7X4 407 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 GTF3C2Q8WUA4 911 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 APPBP2Q92624 585 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 EVI5LQ96CN4 794 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 OPTNQ96CV9 577 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms