RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 DNERQ8NFT8 737 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 POLR3EQ9NVU0 708 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 NEDD4P46934 1319 aa16.92■□□□□ 0.3
SMARCE1-209ENST00000478349 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 NFIBO00712 420 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 KDM4AO75164 1064 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 ITGB8P26012 769 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 CALML3P27482 149 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 BEX3Q00994 111 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 PPP2R5BQ15173 497 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 DUSP28Q4G0W2 176 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 CXCL17Q6UXB2 119 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 EXOC6Q8TAG9 804 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 FAM161BQ96MY7 647 aa16.91■□□□□ 0.3
SMARCE1-209ENST00000478349 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 IGHDP01880 384 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 TAPT1Q6NXT6 567 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 SCFD2Q8WU76 684 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 GUCD1Q96NT3 240 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 ASTN1O14525 1302 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 ABCB11O95342 1321 aa16.9■□□□□ 0.3
SMARCE1-209ENST00000478349 CTAGE5O15320 804 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 KPNA6O60684 536 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 TRDNQ13061 729 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 SLC30A10Q6XR72 485 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 SLC43A3Q8NBI5 491 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 HIPK3Q9H422 1215 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 DNAH12Q6ZR08 3092 aa16.89■□□□□ 0.29
SMARCE1-209ENST00000478349 DLL1O00548 723 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 RPS6P62753 249 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 TRAF1Q13077 416 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 CDC37Q16543 378 aaPredicted RBP16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 USH1GQ495M9 461 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 ANKS1AQ92625 1134 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 PDGFCQ9NRA1 345 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 TNKSO95271 1327 aa16.88■□□□□ 0.29
SMARCE1-209ENST00000478349 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 RBM47A0AV96 593 aaKnown RBP16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 B4E1Z4 1266 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 CD4P01730 458 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 CSF2RAP15509 400 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 DNAJB2P25686 324 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 EPHB4P54760 987 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 TTLL4Q14679 1199 aa16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 CDX2Q99626 313 aaPredicted RBP16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.293e-7■■■□□ 15.4
SMARCE1-209ENST00000478349 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
SMARCE1-209ENST00000478349 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 FOSL2P15408 326 aa16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 EDNRBP24530 442 aa16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 ENAHQ8N8S7 591 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 NSUN6Q8TEA1 469 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 IL23AQ9NPF7 189 aa16.86■□□□□ 0.29
SMARCE1-209ENST00000478349 LRRC37A2A6NM11 1700 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 ERICH2A1L162 156 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 PFKMP08237 780 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 MYL3P08590 195 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 RAB30Q15771 203 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 FBXO11Q86XK2 927 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 ADGRF4Q8IZF3 695 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 MAFAQ8NHW3 353 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 TIFAQ96CG3 184 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 PURBQ96QR8 312 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 ZSWIM5Q9P217 1185 aa16.85■□□□□ 0.29
SMARCE1-209ENST00000478349 FGBP02675 491 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 TXNP10599 105 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 CYP2C18P33260 490 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 PURAQ00577 322 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 TMEM240Q5SV17 173 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 IWS1Q96ST2 819 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 MSRAQ9UJ68 235 aa16.84■□□□□ 0.29
SMARCE1-209ENST00000478349 B4GALT4O60513 344 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms