RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IKQ13123 557 aaPredicted RBP24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 MUM1L1Q5H9M0 696 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 HERC6Q8IVU3 1022 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 NEDD1Q8NHV4 660 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 APPBP2Q92624 585 aa24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 KHSRPQ92945 711 aaKnown RBP eCLIP24.09■■□□□ 1.45
PDLIM1-202ENST00000477757 PITPNM1O00562 1244 aa24.08■■□□□ 1.45
PDLIM1-202ENST00000477757 SLC1A4P43007 532 aa24.08■■□□□ 1.45
PDLIM1-202ENST00000477757 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.45
PDLIM1-202ENST00000477757 SCN10AQ9Y5Y9 1956 aa24.08■■□□□ 1.45
PDLIM1-202ENST00000477757 GPAA1O43292 621 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 TSPY3P0CV98 308 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 TSPY8P0CW00 308 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 GNAT2P19087 354 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 CPT1AP50416 773 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 GRB10Q13322 594 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 KBTBD3Q8NAB2 608 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 ZBTB40Q9NUA8 1239 aa24.07■■□□□ 1.44
PDLIM1-202ENST00000477757 LPXNO60711 386 aa24.06■■□□□ 1.44
PDLIM1-202ENST00000477757 NSMFQ6X4W1 530 aa24.06■■□□□ 1.44
PDLIM1-202ENST00000477757 MTG1Q9BT17 334 aaPredicted RBP24.06■■□□□ 1.44
PDLIM1-202ENST00000477757 BRWD1Q9NSI6 2320 aa24.06■■□□□ 1.44
PDLIM1-202ENST00000477757 FAM86C2PA6NEL3 165 aa24.05■■□□□ 1.44
PDLIM1-202ENST00000477757 KIF28PB7ZC32 967 aa24.05■■□□□ 1.44
PDLIM1-202ENST00000477757 BAIAP3O94812 1187 aa24.05■■□□□ 1.44
PDLIM1-202ENST00000477757 PURBQ96QR8 312 aaKnown RBP24.05■■□□□ 1.44
PDLIM1-202ENST00000477757 WDR11Q9BZH6 1224 aa24.05■■□□□ 1.44
PDLIM1-202ENST00000477757 LOC102724159A0A0B4J2E5 919 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 MYL3P08590 195 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 IQCF3P0C7M6 154 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 MCCP23508 829 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 PDE4BQ07343 736 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 PWP2Q15269 919 aaKnown RBP24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 FAM47CQ5HY64 1035 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 NFRKBQ6P4R8 1299 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 SPRED2Q7Z698 418 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 FTOQ9C0B1 505 aaKnown RBP eCLIP24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 ECHDC1Q9NTX5 307 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 ADD3Q9UEY8 706 aaKnown RBP24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 CCPG1Q9ULG6 757 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 PRR12Q9ULL5 1215 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 DDX19BQ9UMR2 479 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 PTPRSQ13332 1948 aa24.04■■□□□ 1.44
PDLIM1-202ENST00000477757 RBM47A0AV96 593 aaKnown RBP24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 RNF113AO15541 343 aaKnown RBP24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 ZFYP08048 801 aaPredicted RBP24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 MS4A1P11836 297 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 ALDH5A1P51649 535 aaPredicted RBP24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 SNAP25P60880 206 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 TFAP4Q01664 338 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 NBPF20Q3BBV1 942 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 KCTD1Q719H9 257 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 RETREG2Q8NC44 543 aa24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 GPHNQ9NQX3 736 aaPredicted RBP24.03■■□□□ 1.44
PDLIM1-202ENST00000477757 PI4K2BG5E9Z4 385 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 M0R2C6 588 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 APPP05067 770 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 ICAM1P05362 532 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 PPP4R3BQ5MIZ7 849 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 RCSD1Q6JBY9 416 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 OR6J1Q8NGC5 347 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 CHMP4CQ96CF2 233 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 LMCD1Q9NZU5 365 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 RAD50Q92878 1312 aa24.02■■□□□ 1.44
PDLIM1-202ENST00000477757 PTPN11Q06124 597 aaPredicted RBP24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 BFSP2Q13515 415 aa24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 BRDTQ58F21 947 aaPredicted RBP24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 RASGRP2Q7LDG7 609 aa24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 IFNL3Q8IZI9 196 aa24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 CD320Q9NPF0 282 aa24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 TET1Q8NFU7 2136 aa24.01■■□□□ 1.43
PDLIM1-202ENST00000477757 PATL2C9JE40 543 aaKnown RBP24■■□□□ 1.43
PDLIM1-202ENST00000477757 SLC3A2P08195 630 aaKnown RBP24■■□□□ 1.43
PDLIM1-202ENST00000477757 KCNJ6P48051 423 aa24■■□□□ 1.43
PDLIM1-202ENST00000477757 GDPD5Q8WTR4 605 aa24■■□□□ 1.43
PDLIM1-202ENST00000477757 NACAP1Q9BZK3 213 aa24■■□□□ 1.43
PDLIM1-202ENST00000477757 LCHNA4D1U4 455 aa23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 A6NJR5 290 aa23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 KPNA6O60684 536 aa23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 WDR5P61964 334 aaKnown RBP23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 BAATQ14032 418 aaPredicted RBP23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 LRRFIP1Q32MZ4 808 aaKnown RBP23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 PPP1R13LQ8WUF5 828 aa23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 RANBP17Q9H2T7 1088 aaKnown RBP23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 STX8Q9UNK0 236 aa23.99■■□□□ 1.43
PDLIM1-202ENST00000477757 NFIBO00712 420 aa23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 NKRFO15226 690 aaKnown RBP eCLIP23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 SMARCA5O60264 1052 aaPredicted RBP23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 PPARAQ07869 468 aa23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 PPP2R5BQ15173 497 aa23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 NOD1Q9Y239 953 aa23.98■■□□□ 1.43
PDLIM1-202ENST00000477757 AFAP1L1Q8TED9 768 aa23.97■■□□□ 1.43
PDLIM1-202ENST00000477757 UBE2ZQ9H832 354 aaPredicted RBP23.97■■□□□ 1.43
PDLIM1-202ENST00000477757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.97■■□□□ 1.43
PDLIM1-202ENST00000477757 PRR33A8MZF0 331 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 HNRNPUQ00839 825 aaKnown RBP eCLIP23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 SLC30A10Q6XR72 485 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 CCDC155Q8N6L0 562 aa23.96■■□□□ 1.43
PDLIM1-202ENST00000477757 CAGE1Q8TC20 777 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms