RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SLC9A7Q96T83 725 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 POLR3EQ9NVU0 708 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 XIRP2A4UGR9 3374 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 RNF113AO15541 343 aaKnown RBP19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 SMARCA5O60264 1052 aaPredicted RBP19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 PLA2G6O60733 806 aa19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 APPP05067 770 aa19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 GNAT2P19087 354 aa19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 NSMFQ6X4W1 530 aa19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 KHSRPQ92945 711 aaKnown RBP eCLIP19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
APOBEC3F-203ENST00000476513 MYL3P08590 195 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 RFC2P35250 354 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 TFAP4Q01664 338 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 GRB10Q13322 594 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 KCTD1Q719H9 257 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 HERC6Q8IVU3 1022 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 IFNL3Q8IZI9 196 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 WDR11Q9BZH6 1224 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 ECHDC1Q9NTX5 307 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
APOBEC3F-203ENST00000476513 PATL2C9JE40 543 aaKnown RBP19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 M0R2C6 588 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 IQCF3P0C7M6 154 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 MS4A1P11836 297 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 NBPF20Q3BBV1 942 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 RCSD1Q6JBY9 416 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 SPRED2Q7Z698 418 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 MTG1Q9BT17 334 aaPredicted RBP19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 CCPG1Q9ULG6 757 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 PRR12Q9ULL5 1215 aa19.53■□□□□ 0.72
APOBEC3F-203ENST00000476513 LPXNO60711 386 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 GPR37L1O60883 481 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 CPT1AP50416 773 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 PDE4BQ07343 736 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 FAM47CQ5HY64 1035 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 RASGRP2Q7LDG7 609 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 RETREG2Q8NC44 543 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 PPP1R13LQ8WUF5 828 aa19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
APOBEC3F-203ENST00000476513 SCN5AQ14524 2016 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 REV3LO60673 3130 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 FAM86C2PA6NEL3 165 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 KIF28PB7ZC32 967 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 PITPNM1O00562 1244 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 ZFYP08048 801 aaPredicted RBP19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 ALDH5A1P51649 535 aaPredicted RBP19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 BAATQ14032 418 aaPredicted RBP19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 OR6J1Q8NGC5 347 aa19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 ADD3Q9UEY8 706 aaKnown RBP19.51■□□□□ 0.71
APOBEC3F-203ENST00000476513 ICAM1P05362 532 aa19.5■□□□□ 0.71
APOBEC3F-203ENST00000476513 NFRKBQ6P4R8 1299 aa19.5■□□□□ 0.71
APOBEC3F-203ENST00000476513 NACAP1Q9BZK3 213 aa19.5■□□□□ 0.71
APOBEC3F-203ENST00000476513 CD320Q9NPF0 282 aa19.5■□□□□ 0.71
APOBEC3F-203ENST00000476513 PIEZO1Q92508 2521 aa19.5■□□□□ 0.71
APOBEC3F-203ENST00000476513 LCTP09848 1927 aa19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 SLC3A2P08195 630 aaKnown RBP19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 PPARAQ07869 468 aa19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 PPP4R3BQ5MIZ7 849 aa19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 TSHZ3Q63HK5 1081 aa19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 STX8Q9UNK0 236 aa19.49■□□□□ 0.71
APOBEC3F-203ENST00000476513 TRANK1O15050 2925 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 LOC102724159A0A0B4J2E5 919 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 PI4K2BG5E9Z4 385 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 NFIBO00712 420 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 NMT2O60551 498 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 BAIAP3O94812 1187 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 PWP2Q15269 919 aaKnown RBP19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 RANBP17Q9H2T7 1088 aaKnown RBP19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 IL17RBQ9NRM6 502 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
APOBEC3F-203ENST00000476513 SCN10AQ9Y5Y9 1956 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 LCHNA4D1U4 455 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 A6NJR5 290 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 PTPN11Q06124 597 aaPredicted RBP19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 BFSP2Q13515 415 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 BRDTQ58F21 947 aaPredicted RBP19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 GDPD5Q8WTR4 605 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 SEC62Q99442 399 aaKnown RBP19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 NAPBQ9H115 298 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 MUC6Q6W4X9 2439 aa19.47■□□□□ 0.71
APOBEC3F-203ENST00000476513 BRWD1Q9NSI6 2320 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 TSPY2A6NKD2 308 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 NKRFO15226 690 aaKnown RBP eCLIP19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 KPNA6O60684 536 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 SLC16A2P36021 539 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 KCNJ6P48051 423 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 WDR5P61964 334 aaKnown RBP19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 PPP2R5BQ15173 497 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 CCDC96Q2M329 555 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 TTBK2Q6IQ55 1244 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 SLC30A10Q6XR72 485 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 TMCO2Q7Z6W1 182 aaPredicted RBP19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 COPS5Q92905 334 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms