RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SRCIN1Q9C0H9 1055 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 TNNQ9UQP3 1299 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 MAST4O15021 2626 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 RALGAPA2Q2PPJ7 1873 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 FRYQ5TBA9 3013 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 LINC01565O15544 149 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 CXCL10P02778 98 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 ADRB1P08588 477 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 SHMT1P34896 483 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 KCNJ6P48051 423 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 HDAC1Q13547 482 aaPredicted RBP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 FSCN1Q16658 493 aaKnown RBP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 PTPN21Q16825 1174 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 TMEM63BQ5T3F8 832 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 TBC1D9Q6ZT07 1266 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 SMRP1Q8NCR6 262 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 FTOQ9C0B1 505 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLDN4-205ENST00000476494 TANGO6Q9C0B7 1094 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 CLEC1BQ9P126 229 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 CD207Q9UJ71 328 aa7.83□□□□□ -1.16
CLDN4-205ENST00000476494 LMNAP02545 664 aaKnown RBP7.82□□□□□ -1.16
CLDN4-205ENST00000476494 GNAI2P04899 355 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 LINC00271P0C7V0 271 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 STAT3P40763 770 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 GPM6BQ13491 265 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 SEPT2Q15019 361 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 ABCB5Q2M3G0 1257 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 CERKLQ49MI3 558 aaPredicted RBP7.82□□□□□ -1.16
CLDN4-205ENST00000476494 B4GALNT3Q6L9W6 998 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 PI16Q6UXB8 463 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 ARMCX2Q7L311 632 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 ADGRA1Q86SQ6 560 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 SEMA4AQ9H3S1 761 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 INSL6Q9Y581 213 aa7.82□□□□□ -1.16
CLDN4-205ENST00000476494 NAV2Q8IVL1 2488 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 MYO5AQ9Y4I1 1855 aaKnown RBP7.81□□□□□ -1.16
CLDN4-205ENST00000476494 ABHD14A-ACY1A0A1B0GW23 586 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 VWA5AO00534 786 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 NBNO60934 754 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 HMMRO75330 724 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 FLOT1O75955 427 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 SMPD1P17405 629 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 TIMM10P62072 90 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 GSTO1P78417 241 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 TNFAIP2Q03169 654 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 COASYQ13057 564 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 CAMK1Q14012 370 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 ASTLQ6HA08 431 aaPredicted RBP7.81□□□□□ -1.16
CLDN4-205ENST00000476494 CNKSR3Q6P9H4 555 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 TLK2Q86UE8 772 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 DCLK2Q8N568 766 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 PHF7Q9BWX1 381 aaPredicted RBP7.81□□□□□ -1.16
CLDN4-205ENST00000476494 EHD4Q9H223 541 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 FBXO28Q9NVF7 368 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 AATFQ9NY61 560 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLDN4-205ENST00000476494 HMG20BQ9P0W2 317 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 SAP30BPQ9UHR5 308 aaKnown RBP7.81□□□□□ -1.16
CLDN4-205ENST00000476494 Q9Y3F1 56 aa7.81□□□□□ -1.16
CLDN4-205ENST00000476494 C5orf67F2Z3F1 127 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 DYNC1LI2O43237 492 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 CIAO1O76071 339 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 UBTFL1P0CB47 393 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 CLCN5P51795 746 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 PURAQ00577 322 aaKnown RBP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 GABPAQ06546 454 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 LRRFIP1Q32MZ4 808 aaKnown RBP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 KIAA0319Q5VV43 1072 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 TMEM192Q8IY95 271 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 CCDC144CPQ8IYA2 1237 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 SUSD6Q92537 303 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 USP44Q9H0E7 712 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 CEP126Q9P2H0 1117 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 SERPINB13Q9UIV8 391 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 FBXO3Q9UK99 471 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 PCDHB15Q9Y5E8 787 aa7.8□□□□□ -1.16
CLDN4-205ENST00000476494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-205ENST00000476494 CACNA1IQ9P0X4 2223 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 PI15O43692 258 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 LGR5O75473 907 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 HLA-DOAP06340 250 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 RBL2Q08999 1139 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 ANGPT1Q15389 498 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 TAPT1Q6NXT6 567 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 TRAF7Q6Q0C0 670 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 FBXO11Q86XK2 927 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 PPP1R13LQ8WUF5 828 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 MEIS3Q99687 375 aa7.79□□□□□ -1.16
CLDN4-205ENST00000476494 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms