RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RCSD1Q6JBY9 416 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 NSMFQ6X4W1 530 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 EEPD1Q7L9B9 569 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 PHOSPHO2Q8TCD6 241 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 SLC9A7Q96T83 725 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 MPHOSPH6Q99547 160 aaKnown RBP14.93□□□□□ -0.02
SKA3-206ENST00000475251 PDGFCQ9NRA1 345 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 CCPG1Q9ULG6 757 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 COG5Q9UP83 839 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 TNKSO95271 1327 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 RAD50Q92878 1312 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 CHD9Q3L8U1 2897 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 PPARAQ07869 468 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 SCLYQ96I15 445 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 PNMA2Q9UL42 364 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 PRR12Q9ULL5 1215 aa14.92□□□□□ -0.02
SKA3-206ENST00000475251 KIF28PB7ZC32 967 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 M0R2C6 588 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 ICAM1P05362 532 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 MYOGP15173 224 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 MUM1L1Q5H9M0 696 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 KCTD1Q719H9 257 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 RETREG2Q8NC44 543 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 MTG1Q9BT17 334 aaPredicted RBP14.91□□□□□ -0.02
SKA3-206ENST00000475251 RAPGEFL1Q9UHV5 662 aa14.91□□□□□ -0.02
SKA3-206ENST00000475251 NKRFO15226 690 aaKnown RBP eCLIP14.9□□□□□ -0.02
SKA3-206ENST00000475251 KPNA6O60684 536 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 CA3P07451 260 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 ALDH5A1P51649 535 aaPredicted RBP14.9□□□□□ -0.02
SKA3-206ENST00000475251 PURAQ00577 322 aaKnown RBP14.9□□□□□ -0.02
SKA3-206ENST00000475251 PTPN11Q06124 597 aaPredicted RBP14.9□□□□□ -0.02
SKA3-206ENST00000475251 TTLL4Q14679 1199 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 DEFB128Q7Z7B8 93 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 WDR11Q9BZH6 1224 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 TRMT13Q9NUP7 481 aaKnown RBP14.9□□□□□ -0.02
SKA3-206ENST00000475251 HCN4Q9Y3Q4 1203 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
SKA3-206ENST00000475251 MTCH2Q9Y6C9 303 aa14.9□□□□□ -0.02
SKA3-206ENST00000475251 B4DLN1 442 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 MYL3P08590 195 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 CYP2C9P11712 490 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 MRPL12P52815 198 aaKnown RBP14.89□□□□□ -0.03
SKA3-206ENST00000475251 TFF2Q03403 129 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 BFSP2Q13515 415 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 CCDC96Q2M329 555 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 FAM47CQ5HY64 1035 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 OR6J1Q8NGC5 347 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 DCAF4Q8WV16 495 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 NECAB3Q96P71 396 aaPredicted RBP14.89□□□□□ -0.03
SKA3-206ENST00000475251 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
SKA3-206ENST00000475251 RBM47A0AV96 593 aaKnown RBP14.88□□□□□ -0.03
SKA3-206ENST00000475251 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 BAIAP3O94812 1187 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 KCNQ1P51787 676 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 BAATQ14032 418 aaPredicted RBP14.88□□□□□ -0.03
SKA3-206ENST00000475251 PPP2R5BQ15173 497 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 CCDC155Q8N6L0 562 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 FSD1Q9BTV5 496 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
SKA3-206ENST00000475251 RANBP17Q9H2T7 1088 aaKnown RBP14.88□□□□□ -0.03
SKA3-206ENST00000475251 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 NOD1Q9Y239 953 aa14.88□□□□□ -0.03
SKA3-206ENST00000475251 IQCF3P0C7M6 154 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 PTGS1P23219 599 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 SNAP25P60880 206 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 PDE4DQ08499 809 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 HERC6Q8IVU3 1022 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 SCFD2Q8WU76 684 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 ARNTL2Q8WYA1 636 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 HLA-CQ95604 372 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 VWCEQ96DN2 955 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 DCTPP1Q9H773 170 aa14.87□□□□□ -0.03
SKA3-206ENST00000475251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
SKA3-206ENST00000475251 DDX49Q9Y6V7 483 aaKnown RBP14.87□□□□□ -0.03
SKA3-206ENST00000475251 TCF20Q9UGU0 1960 aaKnown RBP14.87□□□□□ -0.03
SKA3-206ENST00000475251 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
SKA3-206ENST00000475251 KCNJ6P48051 423 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 NBPF20Q3BBV1 942 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 TMEM63BQ5T3F8 832 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 DNERQ8NFT8 737 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 PURBQ96QR8 312 aaKnown RBP14.86□□□□□ -0.03
SKA3-206ENST00000475251 SEC62Q99442 399 aaKnown RBP14.86□□□□□ -0.03
SKA3-206ENST00000475251 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 IL17RBQ9NRM6 502 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 MTMR7Q9Y216 660 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 NCOR1O75376 2440 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 TANC1Q9C0D5 1861 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 LCTP09848 1927 aa14.86□□□□□ -0.03
SKA3-206ENST00000475251 A6NJR5 290 aa14.85□□□□□ -0.03
SKA3-206ENST00000475251 RFXAPO00287 272 aa14.85□□□□□ -0.03
SKA3-206ENST00000475251 TLL1O43897 1013 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms