RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SLF2Q8IX21 1173 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 MIER1Q8N108 512 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 GPR161Q8N6U8 529 aaKnown RBP7.18□□□□□ -1.26
VARS-222ENST00000470953 PIK3R5Q8WYR1 880 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 TMEM121BQ9BXQ6 578 aaPredicted RBP7.18□□□□□ -1.26
VARS-222ENST00000470953 CLEC1BQ9P126 229 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 SAP30BPQ9UHR5 308 aaKnown RBP7.18□□□□□ -1.26
VARS-222ENST00000470953 FAM184BQ9ULE4 1060 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 USP18Q9UMW8 372 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 CNOT1A5YKK6 2376 aaKnown RBP7.18□□□□□ -1.26
VARS-222ENST00000470953 A0A1W2PRG0 241 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 DUSP11O75319 330 aaKnown RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 CT47B1P0C2W7 299 aaPredicted RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 NPR3P17342 541 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 NCLP19338 710 aaKnown RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 SP100P23497 879 aaPredicted RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 GUCY1A2P33402 732 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 USP14P54578 494 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 GJA9P57773 515 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 PSMC6P62333 389 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 MTMR3Q13615 1198 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 ITGA7Q13683 1181 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 ZC3H14Q6PJT7 736 aaKnown RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 UBALD2Q8IYN6 164 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 TGFBRAP1Q8WUH2 860 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 ATG4CQ96DT6 458 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 KIF12Q96FN5 646 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 MMP19Q99542 508 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 SIL1Q9H173 461 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 UPF3AQ9H1J1 476 aaKnown RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 DHX36Q9H2U1 1008 aaKnown RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 MROH8Q9H579 483 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 PARD6AQ9NPB6 346 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 GINM1Q9NU53 330 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 CACNA2D2Q9NY47 1150 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 ZHX1Q9UKY1 873 aaPredicted RBP7.17□□□□□ -1.26
VARS-222ENST00000470953 CNPY2Q9Y2B0 182 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 FLT1P17948 1338 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
VARS-222ENST00000470953 CSPG5O95196 566 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 SP9P0CG40 484 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 RFC2P35250 354 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TIMM10P62072 90 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 COASYQ13057 564 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 ADAM15Q13444 863 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TCTN1Q2MV58 587 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 ALDH1L2Q3SY69 923 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 SPTY2D1Q68D10 685 aaPredicted RBP7.16□□□□□ -1.26
VARS-222ENST00000470953 TATDN1Q6P1N9 297 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 ADGRA1Q86SQ6 560 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 SSH1Q8WYL5 1049 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TANGO6Q9C0B7 1094 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TRMT13Q9NUP7 481 aaKnown RBP7.16□□□□□ -1.26
VARS-222ENST00000470953 AATFQ9NY61 560 aaKnown RBP eCLIP7.16□□□□□ -1.26
VARS-222ENST00000470953 HOXC10Q9NYD6 342 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 SORCS3Q9UPU3 1222 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.16□□□□□ -1.26
VARS-222ENST00000470953 MCM3APO60318 1980 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 ASTN1O14525 1302 aa7.16□□□□□ -1.26
VARS-222ENST00000470953 TEX15Q9BXT5 2789 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 PIEZO2Q9H5I5 2752 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 NLRC5Q86WI3 1866 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 AKAP13Q12802 2813 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 DOPEY1Q5JWR5 2465 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 ZBTB22O15209 634 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 MAP4K4O95819 1239 aaPredicted RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 IQCF3P0C7M6 154 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 CCDC144BQ3MJ40 725 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 PDZD3Q86UT5 571 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 TMEFF1Q8IYR6 380 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 MRPL50Q8N5N7 158 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 PPP1R13LQ8WUF5 828 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 LSM14BQ9BX40 385 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 API5Q9BZZ5 524 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 HMG20BQ9P0W2 317 aa7.15□□□□□ -1.26
VARS-222ENST00000470953 DIS3Q9Y2L1 958 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 PDS5AQ29RF7 1337 aaKnown RBP7.15□□□□□ -1.26
VARS-222ENST00000470953 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 EIF4E1BA6NMX2 242 aaKnown RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 FLOT1O75955 427 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 UBTFL1P0CB47 393 aaPredicted RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 NKX3-2P78367 333 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 EVX2Q03828 476 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 ACVR2BQ13705 512 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 SEPT2Q15019 361 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 CCDC6Q16204 474 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 ABCB5Q2M3G0 1257 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 SPICE1Q8N0Z3 855 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 NETO1Q8TDF5 533 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 ZCCHC14Q8WYQ9 949 aaKnown RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 FRAT1Q92837 279 aaPredicted RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 FGD4Q96M96 766 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 ALDH8A1Q9H2A2 487 aaPredicted RBP7.14□□□□□ -1.27
VARS-222ENST00000470953 SPC25Q9HBM1 224 aa7.14□□□□□ -1.27
VARS-222ENST00000470953 MYO10Q9HD67 2058 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms