RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 WTAPQ15007 396 aa18.6■□□□□ 0.57
COL16A1-209ENST00000470799 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
COL16A1-209ENST00000470799 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
COL16A1-209ENST00000470799 KLHDC9Q8NEP7 349 aa18.6■□□□□ 0.57
COL16A1-209ENST00000470799 KATNBL1Q9H079 304 aa18.6■□□□□ 0.57
COL16A1-209ENST00000470799 ASTN1O14525 1302 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 B4DLN1 442 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 KLRF2D3W0D1 207 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
COL16A1-209ENST00000470799 ADCY6O43306 1168 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 ASGR1P07306 291 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 MRPL12P52815 198 aaKnown RBP18.59■□□□□ 0.57
COL16A1-209ENST00000470799 GJA9P57773 515 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 RPS6P62753 249 aaKnown RBP18.59■□□□□ 0.57
COL16A1-209ENST00000470799 IRX5P78411 483 aaPredicted RBP18.59■□□□□ 0.57
COL16A1-209ENST00000470799 PDE4DQ08499 809 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 SEC23AQ15436 765 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 IQSEC1Q6DN90 963 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 TLK2Q86UE8 772 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 HSCBQ8IWL3 235 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 VTA1Q9NP79 307 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 PDGFCQ9NRA1 345 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 TAF6LQ9Y6J9 622 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
COL16A1-209ENST00000470799 ABCB11O95342 1321 aa18.58■□□□□ 0.57
COL16A1-209ENST00000470799 DCDC2CA8MYV0 355 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 ZEB2O60315 1214 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 BEX3Q00994 111 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 SNX17Q15036 470 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 QRICH1Q2TAL8 776 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 C1orf53Q5VUE5 145 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 CATIPQ7Z7H3 387 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 MCF2L2Q86YR7 1114 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 TDHQ8IZJ6 230 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 UPF3AQ9H1J1 476 aaKnown RBP18.58■□□□□ 0.56
COL16A1-209ENST00000470799 JMJD4Q9H9V9 463 aa18.58■□□□□ 0.56
COL16A1-209ENST00000470799 MRPL11Q9Y3B7 192 aaKnown RBP18.58■□□□□ 0.56
COL16A1-209ENST00000470799 ST18O60284 1047 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 CLTBP09497 229 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 SMPD1P17405 629 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 CST5P28325 142 aaPredicted RBP18.57■□□□□ 0.56
COL16A1-209ENST00000470799 CREB3L3Q68CJ9 461 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 TM6SF1Q9BZW5 370 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 TMEM39AQ9NV64 488 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
COL16A1-209ENST00000470799 LOC102724159A0A0B4J2E5 919 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 MCM2P49736 904 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 PWP2Q15269 919 aaKnown RBP18.56■□□□□ 0.56
COL16A1-209ENST00000470799 FSCN1Q16658 493 aaKnown RBP18.56■□□□□ 0.56
COL16A1-209ENST00000470799 CCSAPQ6IQ19 270 aaPredicted RBP18.56■□□□□ 0.56
COL16A1-209ENST00000470799 TAPT1Q6NXT6 567 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 STOX1Q6ZVD7 989 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 SH3RF1Q7Z6J0 888 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 DNERQ8NFT8 737 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 MORC4Q8TE76 937 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 BADQ92934 168 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 AMNQ9BXJ7 453 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 WDR11Q9BZH6 1224 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 PDLIM7Q9NR12 457 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 MAD2L2Q9UI95 211 aa18.56■□□□□ 0.56
COL16A1-209ENST00000470799 GNEQ9Y223 722 aaKnown RBP18.56■□□□□ 0.56
COL16A1-209ENST00000470799 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 RANBP2P49792 3224 aaKnown RBP18.55■□□□□ 0.56
COL16A1-209ENST00000470799 ELP1O95163 1332 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
COL16A1-209ENST00000470799 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 SLC27A2O14975 620 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 RAG1P15918 1043 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
COL16A1-209ENST00000470799 SENP2Q9HC62 589 aa18.55■□□□□ 0.56
COL16A1-209ENST00000470799 PALM3A6NDB9 673 aaPredicted RBP18.54■□□□□ 0.56
COL16A1-209ENST00000470799 PRC1O43663 620 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 CFBP00751 764 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 PTGS1P23219 599 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 PSMA5P28066 241 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 KRT32Q14532 448 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 GRM4Q14833 912 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 CXCL17Q6UXB2 119 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 RASEFQ8IZ41 740 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 LRCH3Q96II8 777 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 Q9Y3F1 56 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 PCDHA1Q9Y5I3 950 aa18.54■□□□□ 0.56
COL16A1-209ENST00000470799 MROH7Q68CQ1 1323 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 SOX1O00570 391 aaPredicted RBP18.53■□□□□ 0.56
COL16A1-209ENST00000470799 ZBTB5O15062 677 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 CABYRO75952 493 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 MCM5P33992 734 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 NEK4P51957 841 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 TRAF1Q13077 416 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 PPP2R5BQ15173 497 aa18.53■□□□□ 0.56
COL16A1-209ENST00000470799 DUSP28Q4G0W2 176 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms