RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 CALML3P27482 149 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 MAGEA10P43363 369 aaPredicted RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 RPS6P62753 249 aaKnown RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 TROAPQ12815 778 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 TRIM60Q495X7 471 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 CREB3L3Q68CJ9 461 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 MTMR8Q96EF0 704 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 UPF3AQ9H1J1 476 aaKnown RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 COL20A1Q9P218 1284 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 GNEQ9Y223 722 aaKnown RBP14.63□□□□□ -0.07
ABCF1-204ENST00000468958 DOCK5Q9H7D0 1870 aa14.63□□□□□ -0.07
ABCF1-204ENST00000468958 A0A1W2PQ45 241 aaPredicted RBP14.62□□□□□ -0.07
ABCF1-204ENST00000468958 A0A1W2PQY0 241 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 CYTH3O43739 400 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 SMPD1P17405 629 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 GRM4Q14833 912 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 MYL10Q9BUA6 226 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
ABCF1-204ENST00000468958 ASB14A6NK59 587 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
ABCF1-204ENST00000468958 ACLYP53396 1101 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 GJA9P57773 515 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 BEX3Q00994 111 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 WTAPQ15007 396 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 KCNA10Q16322 511 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 TSGA10IPQ3SY00 556 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 TMEM67Q5HYA8 995 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 RNF180Q86T96 592 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 LAMA3Q16787 3333 aa14.61□□□□□ -0.07
ABCF1-204ENST00000468958 SOX1O00570 391 aaPredicted RBP14.6□□□□□ -0.07
ABCF1-204ENST00000468958 PRC1O43663 620 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 C6orf222P0C671 652 aaPredicted RBP14.6□□□□□ -0.07
ABCF1-204ENST00000468958 EDNRBP24530 442 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 ITGB8P26012 769 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 PSMA5P28066 241 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 MCM5P33992 734 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 HSPA4P34932 840 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 NKX3-2P78367 333 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 MDM2Q00987 491 aaPredicted RBP14.6□□□□□ -0.07
ABCF1-204ENST00000468958 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 TAAR1Q96RJ0 339 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 RIOX1Q9H6W3 641 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
ABCF1-204ENST00000468958 ABCB11O95342 1321 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
ABCF1-204ENST00000468958 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 SH2B2O14492 632 aaPredicted RBP14.59□□□□□ -0.07
ABCF1-204ENST00000468958 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
ABCF1-204ENST00000468958 ASGR1P07306 291 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 BMP8BP34820 402 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 ADCK5Q3MIX3 580 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 FBXO11Q86XK2 927 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 SYTL5Q8TDW5 730 aaPredicted RBP14.59□□□□□ -0.07
ABCF1-204ENST00000468958 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
ABCF1-204ENST00000468958 PIGSQ96S52 555 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 TSEN34Q9BSV6 310 aaKnown RBP14.59□□□□□ -0.07
ABCF1-204ENST00000468958 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
ABCF1-204ENST00000468958 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
ABCF1-204ENST00000468958 RXRAP19793 462 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 TLE2Q04725 743 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 ZNF654Q8IZM8 581 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 TMTC2Q8N394 836 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 TMEM87BQ96K49 555 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 VTA1Q9NP79 307 aa14.58□□□□□ -0.08
ABCF1-204ENST00000468958 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.08
ABCF1-204ENST00000468958 SCN10AQ9Y5Y9 1956 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 ZBTB5O15062 677 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 ARIH2O95376 493 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 PLEKHA8P1O95397 391 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 GNASQ5JWF2 1037 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 NUP133Q8WUM0 1156 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 COPS5Q92905 334 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 KCNB2Q92953 911 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 AMNQ9BXJ7 453 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 STARD7Q9NQZ5 370 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 PNMA2Q9UL42 364 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 GRIN2DO15399 1336 aa14.57□□□□□ -0.08
ABCF1-204ENST00000468958 DYNC1LI2O43237 492 aaPredicted RBP14.56□□□□□ -0.08
ABCF1-204ENST00000468958 CDK7P50613 346 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 HSD17B4P51659 736 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 ANAPC15P60006 121 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 GHRHRQ02643 423 aa14.56□□□□□ -0.08
ABCF1-204ENST00000468958 FAAP100Q0VG06 881 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms