RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CPLX2	Q6PUV4	134 aa	Known RBP	13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CYB5R4	Q7L1T6	521 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ARMCX2	Q7L311	632 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	RNF180	Q86T96	592 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	RGS22	Q8NE09	1264 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ZKSCAN3	Q9BRR0	538 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ABHD16B	Q9H3Z7	469 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	GPCPD1	Q9NPB8	672 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CHMP5	Q9NZZ3	219 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CCPG1	Q9ULG6	757 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	NID2	Q14112	1375 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	CCDC196	A0A1B0GTZ2	297 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	CCDC69	A6NI79	296 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	PGK1	P00558	417 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	MYCN	P04198	464 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	MAGEA10	P43363	369 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	RTP1	P59025	263 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	NUCB2	P80303	420 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	GPATCH4	Q5T3I0	446 aa	Known RBP	13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	CCDC144CP	Q8IYA2	1237 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	GTF3C6	Q969F1	213 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	LENG1	Q96BZ8	264 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	TCEANC2	Q96MN5	208 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	MAP3K14	Q99558	947 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	KATNBL1	Q9H079	304 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	LY9	Q9HBG7	655 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	CYP39A1	Q9NYL5	469 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	PNMA2	Q9UL42	364 aa		13.96	□□□□□ -0.17
CTNS-205	ENST00000467663	TNKS	O95271	1327 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	ASB14	A6NK59	587 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	DUSP11	O75319	330 aa	Known RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	CDKL5	O76039	1030 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	PDC	P20941	246 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	PDIA3	P30101	505 aa	Known RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	HMGN5	P82970	282 aa	Known RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	SEC23A	Q15436	765 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	NFXL1	Q6ZNB6	911 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	ENAH	Q8N8S7	591 aa	Predicted RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	PNMA1	Q8ND90	353 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	KLHDC9	Q8NEP7	349 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	FERMT2	Q96AC1	680 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	TSEN34	Q9BSV6	310 aa	Known RBP	13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	SLC12A7	Q9Y666	1083 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	SMCHD1	A6NHR9	2005 aa		13.95	□□□□□ -0.18
CTNS-205	ENST00000467663	ASTN1	O14525	1302 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	SYNRG	Q9UMZ2	1314 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	KLF18	A0A0U1RQI7	1052 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	ZBTB43	O43298	467 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	DDAH1	O94760	285 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	APOBR	Q0VD83	1088 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	CCDC144B	Q3MJ40	725 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	IFIT1B	Q5T764	474 aa	Known RBP	13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	APOA5	Q6Q788	366 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	NSMF	Q6X4W1	530 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	CHST3	Q7LGC8	479 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	MORC4	Q8TE76	937 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	LRRC2	Q9BYS8	371 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	UPF3A	Q9H1J1	476 aa	Known RBP	13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	KAT14	Q9H8E8	782 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	PCDH10	Q9P2E7	1040 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	SMC3	Q9UQE7	1217 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	ATP11B	Q9Y2G3	1177 aa		13.94	□□□□□ -0.18
CTNS-205	ENST00000467663	NFIB	O00712	420 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	ADCY6	O43306	1168 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	GOLGA8H	P0CJ92	632 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	CST5	P28325	142 aa	Predicted RBP	13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	DDIT3	P35638	169 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	GJA9	P57773	515 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	NKX3-2	P78367	333 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	TRIM60	Q495X7	471 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	NOL8	Q76FK4	1167 aa	Known RBP	13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	CATIP	Q7Z7H3	387 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	CLEC4D	Q8WXI8	215 aa		13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	RBM28	Q9NW13	759 aa	Known RBP	13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	RANBP2	P49792	3224 aa	Known RBP	13.93	□□□□□ -0.18
CTNS-205	ENST00000467663	LOC102724159	A0A0B4J2E5	919 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663		A0A1W2PQ45	241 aa	Predicted RBP	13.92	□□□□□ -0.18
CTNS-205	ENST00000467663		A0A1W2PQY0	241 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	MYADML2	A6NDP7	307 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	MOXD2P	A6NHM9	499 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	GOLGA8B	A8MQT2	603 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	CPLX1	O14810	134 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	METAP2	P50579	478 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	ACLY	P53396	1101 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	BAAT	Q14032	418 aa	Predicted RBP	13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	PWP2	Q15269	919 aa	Known RBP	13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	KCNA10	Q16322	511 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	ASPRV1	Q53RT3	343 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	CCDC83	Q8IWF9	413 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	UBE2O	Q9C0C9	1292 aa	Known RBP	13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	UBA5	Q9GZZ9	404 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	PRKAG2	Q9UGJ0	569 aa		13.92	□□□□□ -0.18
CTNS-205	ENST00000467663	CTAGE5	O15320	804 aa		13.91	□□□□□ -0.18
CTNS-205	ENST00000467663	KIF5B	P33176	963 aa		13.91	□□□□□ -0.18
CTNS-205	ENST00000467663	GNAQ	P50148	359 aa		13.91	□□□□□ -0.18
CTNS-205	ENST00000467663	MDM2	Q00987	491 aa	Predicted RBP	13.91	□□□□□ -0.18
CTNS-205	ENST00000467663	TNFAIP2	Q03169	654 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms