RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CPVLQ9H3G5 476 aa14□□□□□ -0.17
CLCNKA-204ENST00000464764 JAG2Q9Y219 1238 aa14□□□□□ -0.17
CLCNKA-204ENST00000464764 TRAPPC10P48553 1259 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 ASIC1P78348 528 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 ARL6IP4Q66PJ3 421 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 IQCEQ6IPM2 695 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 RRAGAQ7L523 313 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 PROCA1Q8NCQ7 364 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 NCAPGQ9BPX3 1015 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 TIAM2Q8IVF5 1701 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 ZNF233A6NK53 670 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 HSF2BPO75031 334 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 KCNB1Q14721 858 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 GEMIN8Q9NWZ8 242 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 PACSIN2Q9UNF0 486 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 OPA1O60313 960 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 USO1O60763 962 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 CCNE1P24864 410 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 EPHB4P54760 987 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 PYM1Q9BRP8 204 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 EPB41L5Q9HCM4 733 aa13.99□□□□□ -0.17
CLCNKA-204ENST00000464764 CCDC194A0A1B0GVG4 234 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 LRRC53A6NM62 1247 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 DDAH1O94760 285 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 CALM1P0DP23 149 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 CALM2P0DP24 149 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 CALM3P0DP25 149 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 MAGEA1P43355 309 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 EVA1CP58658 441 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 GUCY2DQ02846 1103 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 C8orf74Q6P047 294 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 ZNF34Q8IZ26 560 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 PLAGL2Q9UPG8 496 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 TRIM9Q9C026 710 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 HYOU1Q9Y4L1 999 aa13.98□□□□□ -0.17
CLCNKA-204ENST00000464764 A0A0G2JS52 829 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 SLC1A4P43007 532 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 ENOX2Q16206 610 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 PCDHA6Q9UN73 950 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 PCDHA8Q9Y5H6 950 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 BAZ2AQ9UIF9 1905 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 ADAMTSL3P82987 1691 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 IGHMBP2P38935 993 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 PTPROQ16827 1216 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 KLHDC7AQ5VTJ3 777 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 GBP6Q6ZN66 633 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 OTUD6BQ8N6M0 293 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 MYCBPQ99417 103 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 PARP4Q9UKK3 1724 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-204ENST00000464764 H0YHG0 523 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 FTCDO95954 541 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 LSP1P33241 339 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 HEATR3Q7Z4Q2 680 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 DHX37Q8IY37 1157 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 PIK3R5Q8WYR1 880 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 CENPHQ9H3R5 247 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 SLIT2O94813 1529 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 PAFAH1B1P43034 410 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 FNTAP49354 379 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 SKOR1P84550 965 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 RNF187Q5TA31 235 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 CABP7Q86V35 215 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 NLRC4Q9NPP4 1024 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 SIK3Q9Y2K2 1263 aa13.96□□□□□ -0.17
CLCNKA-204ENST00000464764 BACH1O14867 736 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 TECP42680 631 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 CFAP58Q5T655 872 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 ALS2CLQ60I27 953 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 DYMQ7RTS9 669 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 IQCKQ8N0W5 287 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 KRT12Q99456 494 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 JPH2Q9BR39 696 aaPredicted RBP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 NDST4Q9H3R1 872 aa13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 CD248Q9HCU0 757 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms