RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MTMR6Q9Y217 621 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 CFBP00751 764 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 PTPREP23469 700 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 RPS6P62753 249 aaKnown RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 LACTBP83111 547 aaPredicted RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 PKP1Q13835 747 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 BAATQ14032 418 aaPredicted RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 UBE2SQ16763 222 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 RNF207Q6ZRF8 634 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 GLT8D2Q9H1C3 349 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 COL20A1Q9P218 1284 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 PCDHA6Q9UN73 950 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 PCDHA8Q9Y5H6 950 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 DNAJC25-GNG10A0A024R161 153 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 GCOM1H8Y6P7 765 aaPredicted RBP15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 STX6O43752 255 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 STRNO43815 780 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 POLR2MP0CAP2 368 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 HOXA13P31271 388 aaPredicted RBP15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 NSMFQ6X4W1 530 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 SLC30A10Q6XR72 485 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 PLEKHH3Q7Z736 793 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 DIS3L2Q8IYB7 885 aaKnown RBP15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 ABRAQ8N0Z2 381 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 SYTL5Q8TDW5 730 aaPredicted RBP15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 MMP19Q99542 508 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 TMEM260Q9NX78 707 aa15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 BIN2Q9UBW5 565 aaPredicted RBP15.93■□□□□ 0.14
PHACTR4-203ENST00000463428 ZNF236Q9UL36 1845 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 KIF28PB7ZC32 967 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 H3BQV1 296 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 FCER1AP12319 257 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.141e-8■■■■□ 21.1
PHACTR4-203ENST00000463428 KRT2P35908 639 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 NR5A1Q13285 461 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 GRB14Q14449 540 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 ANKRD35Q8N283 1001 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 RASGRP4Q8TDF6 673 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 ARHGAP39Q9C0H5 1083 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 GJD2Q9UKL4 321 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 ZDHHC9Q9Y397 364 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 CEP350Q5VT06 3117 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 PLXNA1Q9UIW2 1896 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 PCNTO95613 3336 aa15.92■□□□□ 0.14
PHACTR4-203ENST00000463428 PFASO15067 1338 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 SLC15A5A6NIM6 579 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 KCTD2Q14681 263 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 EARS2Q5JPH6 523 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 MORN1Q5T089 497 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 WDR78Q5VTH9 848 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 JAKMIP3Q5VZ66 844 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 CCAR1Q8IX12 1150 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 REXO1Q8N1G1 1221 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 FAM133AQ8N9E0 248 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 USP6NLQ92738 828 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 TRIM47Q96LD4 638 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 PURBQ96QR8 312 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 TAAR1Q96RJ0 339 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 FOXP1Q9H334 677 aaPredicted RBP15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 TSKSQ9UJT2 592 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 MYH7BA7E2Y1 1941 aa15.91■□□□□ 0.14
PHACTR4-203ENST00000463428 ASTN1O14525 1302 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 VPS37CA5D8V6 355 aaPredicted RBP15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 EDIL3O43854 480 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 FKTNO75072 461 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 COBLO75128 1261 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 BRD1O95696 1058 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 ADORA2AP29274 412 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 PSMC4P43686 418 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 SAFBQ15424 915 aaKnown RBP eCLIP15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 ZNF296Q8WUU4 475 aaPredicted RBP15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 FGD4Q96M96 766 aa15.9■□□□□ 0.14
PHACTR4-203ENST00000463428 SOWAHBA6NEL2 793 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 TNPO2O14787 897 aaKnown RBP15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 FOSP01100 380 aaPredicted RBP15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 PGK2P07205 417 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 ZSCAN22P10073 491 aaPredicted RBP15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 FCGRTP55899 365 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 RESTQ13127 1097 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 ZNF792Q3KQV3 632 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 CD99L2Q8TCZ2 262 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 PGBD1Q96JS3 809 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 BRMS1Q9HCU9 246 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 IVNS1ABPQ9Y6Y0 642 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 FRMPD4Q14CM0 1322 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 RPTORQ8N122 1335 aa15.89■□□□□ 0.13
PHACTR4-203ENST00000463428 FAM205CA6NFA0 338 aa15.88■□□□□ 0.13
PHACTR4-203ENST00000463428 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
PHACTR4-203ENST00000463428 MAP2K5Q13163 448 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms