RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MAP3K14Q99558 947 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LY9Q9HBG7 655 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ABCB11O95342 1321 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 COBLO75128 1261 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SGPL1O95470 568 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CNGA1P29973 690 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CYP2C19P33261 490 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SNAP25P60880 206 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CACNB2Q08289 660 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TROAPQ12815 778 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 JAKMIP1Q96N16 626 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TINF2Q9BSI4 451 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MAF1Q9H063 256 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DNAJC25-GNG10A0A024R161 153 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 B4DLN1 442 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CYBAP13498 195 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 TRIM32Q13049 653 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 USH1GQ495M9 461 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
HLA-DQB1-207ENST00000460185 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ASB14A6NK59 587 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ZBTB5O15062 677 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 EN2P19622 333 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 PWP2Q15269 919 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MCF2L2Q86YR7 1114 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 JMJD4Q9H9V9 463 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 VAT1LQ9HCJ6 419 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CYP39A1Q9NYL5 469 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
HLA-DQB1-207ENST00000460185 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SEPT4O43236 478 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ZBTB43O43298 467 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SMARCA1P28370 1054 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 RCAN1P53805 252 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MUM1L1Q5H9M0 696 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 FAM133AQ8N9E0 248 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 KCNB2Q92953 911 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SHISA4Q96DD7 197 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 ABHD16BQ9H3Z7 469 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 SENP2Q9HC62 589 aa12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 DDX20Q9UHI6 824 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-207ENST00000460185 NFIBO00712 420 aa11.99□□□□□ -0.49
HLA-DQB1-207ENST00000460185 RARBP10826 455 aa11.99□□□□□ -0.49
HLA-DQB1-207ENST00000460185 AKR1A1P14550 325 aa11.99□□□□□ -0.49
HLA-DQB1-207ENST00000460185 CALML3P27482 149 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms