RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 IKQ13123 557 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 DUSP28Q4G0W2 176 aa25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 SPRED2Q7Z698 418 aa25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 SLC9A7Q96T83 725 aa25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 ZNF287Q9HBT7 754 aa25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 C11orf16Q9NQ32 467 aa25.86■■□□□ 1.73
TNFRSF25-208ENST00000453341 TANC1Q9C0D5 1861 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 M0R2C6 588 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 TSPY3P0CV98 308 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 TSPY8P0CW00 308 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 MCCP23508 829 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 SLC1A4P43007 532 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 TMEM31Q5JXX7 168 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 RASGRP2Q7LDG7 609 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 KBTBD3Q8NAB2 608 aa25.85■■□□□ 1.73
TNFRSF25-208ENST00000453341 COL4A4P53420 1690 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF25-208ENST00000453341 KCTD1Q719H9 257 aa25.84■■□□□ 1.73
TNFRSF25-208ENST00000453341 PPP1R13LQ8WUF5 828 aa25.84■■□□□ 1.73
TNFRSF25-208ENST00000453341 PTPRSQ13332 1948 aa25.84■■□□□ 1.73
TNFRSF25-208ENST00000453341 LPXNO60711 386 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 PLA2G6O60733 806 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 ACTN1P12814 892 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 TFAP4Q01664 338 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 GRB10Q13322 594 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 NSMFQ6X4W1 530 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 HERC6Q8IVU3 1022 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 IFNL3Q8IZI9 196 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 PHOSPHO2Q8TCD6 241 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 HLA-CQ95604 372 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 POLR3EQ9NVU0 708 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 PRR12Q9ULL5 1215 aa25.83■■□□□ 1.73
TNFRSF25-208ENST00000453341 RNF113AO15541 343 aaKnown RBP25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 APPP05067 770 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 MYL3P08590 195 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 GNAT2P19087 354 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 WDR11Q9BZH6 1224 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 LRRCC1Q9C099 1032 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 ECHDC1Q9NTX5 307 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 DDX19BQ9UMR2 479 aa25.82■■□□□ 1.72
TNFRSF25-208ENST00000453341 FAM86C2PA6NEL3 165 aa25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 PATL2C9JE40 543 aaKnown RBP25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 IQCF3P0C7M6 154 aa25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 RFC2P35250 354 aa25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 HNRNPUQ00839 825 aaKnown RBP eCLIP25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 NBPF20Q3BBV1 942 aa25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 CCPG1Q9ULG6 757 aa25.81■■□□□ 1.72
TNFRSF25-208ENST00000453341 GPR37L1O60883 481 aa25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 ALDH5A1P51649 535 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 TSHZ3Q63HK5 1081 aa25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 RCSD1Q6JBY9 416 aa25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 MTG1Q9BT17 334 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 CD320Q9NPF0 282 aa25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 TRIP12Q14669 1992 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF25-208ENST00000453341 RBM47A0AV96 593 aaKnown RBP25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 PITPNM1O00562 1244 aa25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 CPT1AP50416 773 aa25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 PDE4BQ07343 736 aa25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 BAATQ14032 418 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 FAM47CQ5HY64 1035 aa25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 FTOQ9C0B1 505 aaKnown RBP eCLIP25.79■■□□□ 1.72
TNFRSF25-208ENST00000453341 ICAM1P05362 532 aa25.78■■□□□ 1.72
TNFRSF25-208ENST00000453341 MS4A1P11836 297 aa25.78■■□□□ 1.72
TNFRSF25-208ENST00000453341 OR6J1Q8NGC5 347 aa25.78■■□□□ 1.72
TNFRSF25-208ENST00000453341 LCHNA4D1U4 455 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 KIF28PB7ZC32 967 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 NFIBO00712 420 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 NMT2O60551 498 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 SEC62Q99442 399 aaKnown RBP25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 GPHNQ9NQX3 736 aaPredicted RBP25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 IL17RBQ9NRM6 502 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 STX8Q9UNK0 236 aa25.77■■□□□ 1.72
TNFRSF25-208ENST00000453341 ZFYP08048 801 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 PPARAQ07869 468 aa25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 NFRKBQ6P4R8 1299 aa25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 TMCO2Q7Z6W1 182 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 RETREG2Q8NC44 543 aa25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 GDPD5Q8WTR4 605 aa25.76■■□□□ 1.71
TNFRSF25-208ENST00000453341 COPS5Q92905 334 aa25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 RANBP17Q9H2T7 1088 aaKnown RBP25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 INCENPQ9NQS7 918 aa25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 ADD3Q9UEY8 706 aaKnown RBP25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 MTMR7Q9Y216 660 aa25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.75■■□□□ 1.71
TNFRSF25-208ENST00000453341 PI4K2BG5E9Z4 385 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 BAIAP3O94812 1187 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 GPNMBQ14956 572 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 TTBK2Q6IQ55 1244 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 SLC30A10Q6XR72 485 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 NACAP1Q9BZK3 213 aa25.74■■□□□ 1.71
TNFRSF25-208ENST00000453341 LOC102724159A0A0B4J2E5 919 aa25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 RBAK-RBAKDNI3L0D1 243 aa25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 SLC16A2P36021 539 aa25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 BFSP2Q13515 415 aa25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 PWP2Q15269 919 aaKnown RBP25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 NAPBQ9H115 298 aa25.73■■□□□ 1.71
TNFRSF25-208ENST00000453341 PTPDC1A2A3K4 754 aa25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 A6NJR5 290 aa25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 SLC3A2P08195 630 aaKnown RBP25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 WDR5P61964 334 aaKnown RBP25.72■■□□□ 1.71
TNFRSF25-208ENST00000453341 PTPN11Q06124 597 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms