RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TTC28Q96AY4 2481 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 PLIN4Q96Q06 1357 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 NMT2O60551 498 aa21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 ACTN1P12814 892 aa21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 CTDSPL2Q05D32 466 aa21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 BAATQ14032 418 aaPredicted RBP21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 INCENPQ9NQS7 918 aa21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 ADD3Q9UEY8 706 aaKnown RBP21.33■■□□□ 1.01
CHCHD3-203ENST00000448878 CHD9Q3L8U1 2897 aa21.33■■□□□ 1
CHCHD3-203ENST00000448878 TNKSO95271 1327 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 PTPDC1A2A3K4 754 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 RANBP6O60518 1105 aaKnown RBP21.32■■□□□ 1
CHCHD3-203ENST00000448878 PLA2G6O60733 806 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 CA3P07451 260 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 CHMP4BP1P59074 171 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 DUSP28Q4G0W2 176 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 C20orf194Q5TEA3 1177 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 OR6J1Q8NGC5 347 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 PPP1R13LQ8WUF5 828 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 FAM122AQ96E09 287 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 FTOQ9C0B1 505 aaKnown RBP eCLIP21.32■■□□□ 1
CHCHD3-203ENST00000448878 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
CHCHD3-203ENST00000448878 TCF20Q9UGU0 1960 aaKnown RBP21.32■■□□□ 1
CHCHD3-203ENST00000448878 PFKMP08237 780 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 BMP1P13497 986 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 SLC16A2P36021 539 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 CPT1AP50416 773 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 KCNQ1P51787 676 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
CHCHD3-203ENST00000448878 RETREG2Q8NC44 543 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 TOMM22Q9NS69 142 aa21.31■■□□□ 1
CHCHD3-203ENST00000448878 ICAM1P05362 532 aa21.3■■□□□ 1
CHCHD3-203ENST00000448878 CALML3P27482 149 aa21.3■■□□□ 1
CHCHD3-203ENST00000448878 ALDH5A1P51649 535 aaPredicted RBP21.3■■□□□ 1
CHCHD3-203ENST00000448878 MTG1Q9BT17 334 aaPredicted RBP21.3■■□□□ 1
CHCHD3-203ENST00000448878 DCTPP1Q9H773 170 aa21.3■■□□□ 1
CHCHD3-203ENST00000448878 IL17RBQ9NRM6 502 aa21.3■■□□□ 1
CHCHD3-203ENST00000448878 MUC3AQ02505 3323 aa21.3■■□□□ 1
CHCHD3-203ENST00000448878 LRRC37A2A6NM11 1700 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 ERC2O15083 957 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 PURAQ00577 322 aaKnown RBP21.29■■□□□ 1
CHCHD3-203ENST00000448878 TTBK2Q6IQ55 1244 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 ARNTL2Q8WYA1 636 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 C1QTNF1Q9BXJ1 281 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 NOD1Q9Y239 953 aa21.29■■□□□ 1
CHCHD3-203ENST00000448878 KIF28PB7ZC32 967 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 NBPF20Q3BBV1 942 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 MORC4Q8TE76 937 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 VWCEQ96DN2 955 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 GPCPD1Q9NPB8 672 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 MTCH2Q9Y6C9 303 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
CHCHD3-203ENST00000448878 RAD50Q92878 1312 aa21.28■■□□□ 1
CHCHD3-203ENST00000448878 NFIBO00712 420 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 PLA2G5P39877 138 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 PDE4DQ08499 809 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 RRP12Q5JTH9 1297 aaKnown RBP21.27■■□□□ 1
CHCHD3-203ENST00000448878 ZMYM1Q5SVZ6 1142 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 SYDE2Q5VT97 1194 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 KRT40Q6A162 431 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 DCAF4Q8WV16 495 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 SLC9A7Q96T83 725 aa21.27■■□□□ 1
CHCHD3-203ENST00000448878 MPHOSPH6Q99547 160 aaKnown RBP21.27■■□□□ 1
CHCHD3-203ENST00000448878 RANBP17Q9H2T7 1088 aaKnown RBP21.27■■□□□ 1
CHCHD3-203ENST00000448878 PPP2R5BQ15173 497 aa21.26■□□□□ 0.99
CHCHD3-203ENST00000448878 RNF207Q6ZRF8 634 aa21.26■□□□□ 0.99
CHCHD3-203ENST00000448878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
CHCHD3-203ENST00000448878 TTC41PQ6P2S7 1318 aa21.26■□□□□ 0.99
CHCHD3-203ENST00000448878 IQCF3P0C7M6 154 aa21.25■□□□□ 0.99
CHCHD3-203ENST00000448878 RFC2P35250 354 aa21.25■□□□□ 0.99
CHCHD3-203ENST00000448878 SLC30A10Q6XR72 485 aa21.25■□□□□ 0.99
CHCHD3-203ENST00000448878 COPS5Q92905 334 aa21.25■□□□□ 0.99
CHCHD3-203ENST00000448878 SCN5AQ14524 2016 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 EPOPA6NHQ4 379 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 BFSP2Q13515 415 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 PHOSPHO2Q8TCD6 241 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 CHD7Q9P2D1 2997 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 COG5Q9UP83 839 aa21.24■□□□□ 0.99
CHCHD3-203ENST00000448878 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 KPNA6O60684 536 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 TXNP10599 105 aaKnown RBP21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 KCNJ6P48051 423 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 TAP1Q03518 808 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 NFRKBQ6P4R8 1299 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 HERC6Q8IVU3 1022 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 PI4K2BQ8TCG2 481 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 SCFD2Q8WU76 684 aa21.23■□□□□ 0.99
CHCHD3-203ENST00000448878 LCTP09848 1927 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 LOC102724159A0A0B4J2E5 919 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 RBM47A0AV96 593 aaKnown RBP21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 TLL1O43897 1013 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 POU3F3P20264 500 aaPredicted RBP21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 PWP2Q15269 919 aaKnown RBP21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 OTUD7AQ8TE49 926 aaPredicted RBP21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 HLA-CQ95604 372 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 ZBED2Q9BTP6 218 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 EPHX3Q9H6B9 360 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 REV3LO60673 3130 aa21.22■□□□□ 0.99
CHCHD3-203ENST00000448878 B4DLN1 442 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms