RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 CEP89Q96ST8 783 aa12.91□□□□□ -0.34
HCFC1-203ENST00000444191 KCND1Q9NSA2 647 aa12.91□□□□□ -0.34
HCFC1-203ENST00000444191 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
HCFC1-203ENST00000444191 KCNK3O14649 394 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 KRT14P02533 472 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 CALCRLQ16602 461 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 CDKAL1Q5VV42 579 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 FBXL16Q8N461 479 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 ADAMTS1Q9UHI8 967 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 LTN1O94822 1766 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 E7EVH7 732 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 MYBL2P10244 700 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 ZNF76P36508 570 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 PIGSQ96S52 555 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 LIMA1Q9UHB6 759 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 DDAH1O94760 285 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 EEF1GP26641 437 aaKnown RBP12.9□□□□□ -0.34
HCFC1-203ENST00000444191 GNA11P29992 359 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 TUBB4BP68371 445 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 ZBED6P86452 979 aa12.9□□□□□ -0.34
HCFC1-203ENST00000444191 RCCD1A6NED2 376 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 LRRC53A6NM62 1247 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 SLC16A2P36021 539 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 PFKFB3Q16875 520 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 EYA3Q99504 573 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 CAPN6Q9Y6Q1 641 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 ARHGAP25P42331 645 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 DPH5Q9H2P9 285 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 CCNE1P24864 410 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 HERVK_113P62684 666 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 APBA1Q02410 837 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 HYOU1Q9Y4L1 999 aa12.89□□□□□ -0.35
HCFC1-203ENST00000444191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.89□□□□□ -0.35
HCFC1-203ENST00000444191 GNPATO15228 680 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 SEC23AQ15436 765 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 UBE2SQ16763 222 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 CFAP221Q4G0U5 840 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 FBXW10Q5XX13 1052 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 AP1M1Q9BXS5 423 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 HPCAL4Q9UM19 191 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 PDE2AO00408 941 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-203ENST00000444191 KCNQ2O43526 872 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 ABCB4P21439 1286 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-203ENST00000444191 MTRQ99707 1265 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 PLA2G12BQ9BX93 195 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 MINPP1Q9UNW1 487 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 NNTQ13423 1086 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
HCFC1-203ENST00000444191 CNTNAP5Q8WYK1 1306 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 SLC1A4P43007 532 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 IFT88Q13099 833 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 IL17AQ16552 155 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 SFMBT2Q5VUG0 894 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 SPATA4Q8NEY3 305 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 MEIS1O00470 390 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 NT5DC1Q5TFE4 455 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms