RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 FLRT1Q9NZU1 646 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 MRVI1Q9Y6F6 885 aa5.44□□□□□ -1.54
EDEM3-203ENST00000439962 SIPA1L1O43166 1804 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 VWA5AO00534 786 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 HOXD10P28358 340 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CCND3P30281 292 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 LIFRP42702 1097 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 FOSBP53539 338 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CNTN2Q02246 1040 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 STK3Q13188 491 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 SBK1Q52WX2 424 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 GJC2Q5T442 439 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CCDC73Q6ZRK6 1079 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 SGMS1Q86VZ5 419 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 METTL16Q86W50 562 aaKnown RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 PLA2G4DQ86XP0 818 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 PNMA1Q8ND90 353 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 DIS3LQ8TF46 1054 aaKnown RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 VTI1AQ96AJ9 217 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 SLF1Q9BQI6 1058 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 PDCL3Q9H2J4 239 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 SH2D4AQ9H788 454 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 ANO10Q9NW15 660 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 ZHX1Q9UKY1 873 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 ERICH2A1L162 156 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 PPP6R2O75170 966 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CTDNEP1O95476 244 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CCL5P13501 91 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 SYN1P17600 705 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM67Q5HYA8 995 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CT47A1Q5JQC4 288 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 FOXD4L5Q5VV16 416 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 PLEKHH3Q7Z736 793 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 FAM177A1Q8N128 213 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 ENAHQ8N8S7 591 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 NEDD1Q8NHV4 660 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 NPLOC4Q8TAT6 608 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
EDEM3-203ENST00000439962 GDPD2Q9HCC8 539 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 IMPACTQ9P2X3 320 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 CCPG1Q9ULG6 757 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 MYH8P13535 1937 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 ATAD5Q96QE3 1844 aa5.43□□□□□ -1.54
EDEM3-203ENST00000439962 DDX60LQ5H9U9 1706 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 COBLO75128 1261 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 CNMDO75829 334 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PGK1P00558 417 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 DSG3P32926 999 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 GCLCP48506 637 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 CCNA1P78396 465 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 MLLT1Q03111 559 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 KCTD2Q14681 263 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 GLIPR1L2Q4G1C9 344 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 ENGASEQ8NFI3 743 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 TBC1D5Q92609 795 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 ZSCAN10Q96SZ4 725 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 KRT23Q9C075 422 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 DACT1Q9NYF0 836 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 DOCK1Q14185 1865 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 UNCXA6NJT0 531 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 KIF2AO00139 706 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 NFIBO00712 420 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 WDR46O15213 610 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 ZBED4O75132 1171 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 FCER1AP12319 257 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 HOXA7P31268 230 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 HOXA13P31271 388 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 SP4Q02446 784 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 ARHGEF6Q15052 776 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 MUM1L1Q5H9M0 696 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 TMEM63BQ5T3F8 832 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 GIMAP6Q6P9H5 292 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 LBX2Q6XYB7 198 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 FCHSD1Q86WN1 690 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PRPF38AQ8NAV1 312 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 MYRIPQ8NFW9 859 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 FBXO18Q8NFZ0 1043 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 KIAA1524Q8TCG1 905 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 BICD2Q8TD16 824 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 U2AF1L4Q8WU68 220 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 MRPS27Q92552 414 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PGBD1Q96JS3 809 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 MMP19Q99542 508 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 RNF41Q9H4P4 317 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PPP1R9AQ9ULJ8 1098 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PRR12Q9ULL5 1215 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 REV3LO60673 3130 aa5.42□□□□□ -1.54
EDEM3-203ENST00000439962 PRC1O43663 620 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 KINO60870 393 aaKnown RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CFBP00751 764 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 PDHBP11177 359 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 LIG1P18858 919 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 GSDMDP57764 484 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CCT2P78371 535 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms