RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 MYL5Q02045 173 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 PTPREP23469 700 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 SNRNP48Q6IEG0 339 aaKnown RBP12.35□□□□□ -0.43
HIPK2-203ENST00000428878 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 TRAF5O00463 557 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
HIPK2-203ENST00000428878 FANCCQ00597 558 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
HIPK2-203ENST00000428878 ATL3Q6DD88 541 aa12.35□□□□□ -0.43
HIPK2-203ENST00000428878 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 FSD2A1L4K1 749 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTECB2RU33 542 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SLC37A4O43826 429 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SKILP12757 684 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 LMNB1P20700 586 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 GPBP1Q86WP2 473 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 FERMT2Q96AC1 680 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 NLRP12P59046 1061 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SUGT1Q9Y2Z0 365 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SRPRBQ9Y5M8 271 aaKnown RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 V9GYY5 206 aaPredicted RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 GAKO14976 1311 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.433e-6■■■■□ 22.4
HIPK2-203ENST00000428878 AMPD3Q01432 767 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
HIPK2-203ENST00000428878 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 ANKRD36CQ5JPF3 1778 aa12.34□□□□□ -0.43
HIPK2-203ENST00000428878 PSMA7O14818 248 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
HIPK2-203ENST00000428878 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
HIPK2-203ENST00000428878 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 FBXO2Q9UK22 296 aaPredicted RBP12.33□□□□□ -0.44
HIPK2-203ENST00000428878 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 BAZ2AQ9UIF9 1905 aaKnown RBP12.33□□□□□ -0.44
HIPK2-203ENST00000428878 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 LRCH2Q5VUJ6 765 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
HIPK2-203ENST00000428878 FAM13AO94988 1023 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 MARK3P27448 753 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 UBXN1Q04323 297 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 PPP4R3BQ5MIZ7 849 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 CSGALNACT2Q8N6G5 542 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 BANK1Q8NDB2 785 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 PPP1R13LQ8WUF5 828 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 BICD1Q96G01 975 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 PAGE5Q96GU1 130 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 TCHHQ07283 1943 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 COL4A1P02462 1669 aa12.33□□□□□ -0.44
HIPK2-203ENST00000428878 CAP2P40123 477 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 TSC1Q92574 1164 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 PPP6R2O75170 966 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 ENTPD3O75355 529 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 TNNT1P13805 278 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 IGBP1P78318 339 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 MYCT1Q8N699 235 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 DRC1Q96MC2 740 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 A0A1W2PQD8 194 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 ZNF75DP51815 510 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 CDR1P51861 262 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 CACNA2D4Q7Z3S7 1137 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 TCHPQ9BT92 498 aa12.32□□□□□ -0.44
HIPK2-203ENST00000428878 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 MRPL11Q9Y3B7 192 aaKnown RBP12.32□□□□□ -0.44
HIPK2-203ENST00000428878 NFIBO00712 420 aa12.31□□□□□ -0.44
HIPK2-203ENST00000428878 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
HIPK2-203ENST00000428878 RESP18Q5W5W9 173 aa12.31□□□□□ -0.44
HIPK2-203ENST00000428878 AGBL3Q8NEM8 1001 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms