RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 RAD9AQ99638 391 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 PRRX2Q99811 253 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 UPF3BQ9BZI7 483 aaKnown RBP12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 FAM50BQ9Y247 325 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 COL4A6Q14031 1691 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 IGKV6D-41A0A0C4DH26 115 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 H3BQ06 376 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 BCAR3O75815 825 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 MBD4O95243 580 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 IRS1P35568 1242 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 TKFCQ3LXA3 575 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 MKL1Q969V6 931 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 PABPC5Q96DU9 382 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
RAPGEF1-205ENST00000419442 RBM47A0AV96 593 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 ANP32CO43423 234 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CXCL10P02778 98 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 RASA1P20936 1047 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CPT1AP50416 773 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 RBL2Q08999 1139 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 TCF15Q12870 199 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 RPAP2Q8IXW5 612 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CAGE1Q8TC20 777 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 MTUS1Q9ULD2 1270 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
RAPGEF1-205ENST00000419442 LOC102724159A0A0B4J2E5 919 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 PARNO95453 639 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 MYL3P08590 195 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 ADD2P35612 726 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 PKN1Q16512 942 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 IER5LQ5T953 404 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 AACSQ86V21 672 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 CYP39A1Q9NYL5 469 aa12.57□□□□□ -0.4
RAPGEF1-205ENST00000419442 GOLIM4O00461 696 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 GFRA3O60609 400 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 KPNA6O60684 536 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 EFCAB14O75071 495 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 PTPROQ16827 1216 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 TCTN1Q2MV58 587 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 CCDC155Q8N6L0 562 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 EDAQ92838 391 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 C17orf80Q9BSJ5 609 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
RAPGEF1-205ENST00000419442 USP34Q70CQ2 3546 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 A6NJR5 290 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 NBNO60934 754 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 BMP3P12645 472 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SELPP16109 830 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 HTRA4P83105 476 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SMAD2Q15796 467 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 LRRC8DQ7L1W4 858 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 BANK1Q8NDB2 785 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 SAMD11Q96NU1 681 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
RAPGEF1-205ENST00000419442 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 NKRFO15226 690 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 LTBRP36941 435 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms