RNA–Protein interactions for RNA: ENST00000419338.5

DDX39B-206, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-206ENST00000419338 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
DDX39B-206ENST00000419338 NACAP1Q9BZK3 213 aa16.66■□□□□ 0.26
DDX39B-206ENST00000419338 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
DDX39B-206ENST00000419338 ADD3Q9UEY8 706 aaKnown RBP16.66■□□□□ 0.26
DDX39B-206ENST00000419338 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
DDX39B-206ENST00000419338 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 TLL1O43897 1013 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 APPP05067 770 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 CYP2C9P11712 490 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 PTGS1P23219 599 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDX39B-206ENST00000419338 TFAP4Q01664 338 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 MUM1L1Q5H9M0 696 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 EEPD1Q7L9B9 569 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 HLA-CQ95604 372 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
DDX39B-206ENST00000419338 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
DDX39B-206ENST00000419338 LCTP09848 1927 aa16.64■□□□□ 0.26
DDX39B-206ENST00000419338 RBM47A0AV96 593 aaKnown RBP16.64■□□□□ 0.25
DDX39B-206ENST00000419338 RFXAPO00287 272 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 BAIAP3O94812 1187 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 MCCP23508 829 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 TAP1Q03518 808 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
DDX39B-206ENST00000419338 BRDTQ58F21 947 aaPredicted RBP16.64■□□□□ 0.25
DDX39B-206ENST00000419338 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 EPHX3Q9H6B9 360 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
DDX39B-206ENST00000419338 PRR12Q9ULL5 1215 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 RAD50Q92878 1312 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
DDX39B-206ENST00000419338 PRRC2BQ5JSZ5 2229 aaKnown RBP16.64■□□□□ 0.25
DDX39B-206ENST00000419338 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 NKRFO15226 690 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX39B-206ENST00000419338 KPNA6O60684 536 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 GPR37L1O60883 481 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 ICAM1P05362 532 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
DDX39B-206ENST00000419338 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 RETREG2Q8NC44 543 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 LMCD1Q9NZU5 365 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
DDX39B-206ENST00000419338 EPOPA6NHQ4 379 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 M0R2C6 588 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 IQCF3P0C7M6 154 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 BFSP2Q13515 415 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 ARNTL2Q8WYA1 636 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 NAPBQ9H115 298 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 CERS4Q9HA82 394 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
DDX39B-206ENST00000419338 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
DDX39B-206ENST00000419338 MYL3P08590 195 aa16.61■□□□□ 0.25
DDX39B-206ENST00000419338 PPARAQ07869 468 aa16.61■□□□□ 0.25
DDX39B-206ENST00000419338 NBPF20Q3BBV1 942 aa16.61■□□□□ 0.25
DDX39B-206ENST00000419338 OR6J1Q8NGC5 347 aa16.61■□□□□ 0.25
DDX39B-206ENST00000419338 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
DDX39B-206ENST00000419338 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
DDX39B-206ENST00000419338 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
DDX39B-206ENST00000419338 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 SMARCA5O60264 1052 aaPredicted RBP16.6■□□□□ 0.25
DDX39B-206ENST00000419338 NOVP48745 357 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 GRB10Q13322 594 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 BAATQ14032 418 aaPredicted RBP16.6■□□□□ 0.25
DDX39B-206ENST00000419338 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 BTNL9Q6UXG8 535 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 DCAF4Q8WV16 495 aa16.6■□□□□ 0.25
DDX39B-206ENST00000419338 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX39B-206ENST00000419338 A6NJR5 290 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 PARNO95453 639 aaKnown RBP16.59■□□□□ 0.25
DDX39B-206ENST00000419338 KCNJ6P48051 423 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 SNAP25P60880 206 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 KRT40Q6A162 431 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 CCDC155Q8N6L0 562 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
DDX39B-206ENST00000419338 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
DDX39B-206ENST00000419338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX39B-206ENST00000419338 PI4K2BG5E9Z4 385 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 LPXNO60711 386 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 EDNRBP24530 442 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 DNERQ8NFT8 737 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 NOD1Q9Y239 953 aa16.58■□□□□ 0.24
DDX39B-206ENST00000419338 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
DDX39B-206ENST00000419338 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
DDX39B-206ENST00000419338 B4DLN1 442 aa16.57■□□□□ 0.24
DDX39B-206ENST00000419338 NFIBO00712 420 aa16.57■□□□□ 0.24
DDX39B-206ENST00000419338 MRPL12P52815 198 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms