RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 CEACAM5P06731 702 aa4.32□□□□□ -1.72
APP-207ENST00000415997 ITPKAP23677 461 aa4.32□□□□□ -1.72
APP-207ENST00000415997 TM4SF4P48230 202 aa4.32□□□□□ -1.72
APP-207ENST00000415997 IKZF1Q13422 519 aa4.32□□□□□ -1.72
APP-207ENST00000415997 KCNMB1Q16558 191 aa4.32□□□□□ -1.72
APP-207ENST00000415997 LRIT3Q3SXY7 679 aa4.32□□□□□ -1.72
APP-207ENST00000415997 PRR5LQ6MZQ0 368 aa4.32□□□□□ -1.72
APP-207ENST00000415997 PHLDB3Q6NSJ2 640 aa4.32□□□□□ -1.72
APP-207ENST00000415997 DLK2Q6UY11 383 aa4.32□□□□□ -1.72
APP-207ENST00000415997 SPOCD1Q6ZMY3 1216 aa4.32□□□□□ -1.72
APP-207ENST00000415997 OTOP1Q7RTM1 612 aa4.32□□□□□ -1.72
APP-207ENST00000415997 RASAL3Q86YV0 1011 aa4.32□□□□□ -1.72
APP-207ENST00000415997 FAM84AQ96KN4 292 aa4.32□□□□□ -1.72
APP-207ENST00000415997 GUCD1Q96NT3 240 aa4.32□□□□□ -1.72
APP-207ENST00000415997 PSMD1Q99460 953 aa4.32□□□□□ -1.72
APP-207ENST00000415997 R3HDMLQ9H3Y0 253 aa4.32□□□□□ -1.72
APP-207ENST00000415997 ZNF408Q9H9D4 720 aa4.32□□□□□ -1.72
APP-207ENST00000415997 GPN3Q9UHW5 284 aaPredicted RBP4.32□□□□□ -1.72
APP-207ENST00000415997 PLAGL2Q9UPG8 496 aa4.32□□□□□ -1.72
APP-207ENST00000415997 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
APP-207ENST00000415997 BAHCC1Q9P281 2608 aa4.31□□□□□ -1.72
APP-207ENST00000415997 EPG5Q9HCE0 2579 aa4.31□□□□□ -1.72
APP-207ENST00000415997 ZNF609O15014 1411 aa4.31□□□□□ -1.72
APP-207ENST00000415997 A0A1W2PP64 1363 aa4.31□□□□□ -1.72
APP-207ENST00000415997 TONSLQ96HA7 1378 aa4.31□□□□□ -1.72
APP-207ENST00000415997 CDHR2Q9BYE9 1310 aa4.31□□□□□ -1.72
APP-207ENST00000415997 TMEM238LA0A1B0GVL6 79 aa4.31□□□□□ -1.72
APP-207ENST00000415997 KLRG2A4D1S0 409 aaPredicted RBP4.31□□□□□ -1.72
APP-207ENST00000415997 H3BRB1 525 aa4.31□□□□□ -1.72
APP-207ENST00000415997 GSTP1P09211 210 aaKnown RBP4.31□□□□□ -1.72
APP-207ENST00000415997 ZNF865P0CJ78 1059 aaPredicted RBP4.31□□□□□ -1.72
APP-207ENST00000415997 RAP1GAPP47736 663 aa4.31□□□□□ -1.72
APP-207ENST00000415997 OXCT1P55809 520 aa4.31□□□□□ -1.72
APP-207ENST00000415997 CAP1Q01518 475 aa4.31□□□□□ -1.72
APP-207ENST00000415997 FAAP100Q0VG06 881 aa4.31□□□□□ -1.72
APP-207ENST00000415997 OLFM4Q6UX06 510 aa4.31□□□□□ -1.72
APP-207ENST00000415997 DTHD1Q6ZMT9 781 aa4.31□□□□□ -1.72
APP-207ENST00000415997 ZSWIM9Q86XI8 627 aa4.31□□□□□ -1.72
APP-207ENST00000415997 GLYCTKQ8IVS8 523 aa4.31□□□□□ -1.72
APP-207ENST00000415997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.31□□□□□ -1.72
APP-207ENST00000415997 RTKN2Q8IZC4 609 aa4.31□□□□□ -1.72
APP-207ENST00000415997 CCDC74AQ96AQ1 378 aa4.31□□□□□ -1.72
APP-207ENST00000415997 MASTLQ96GX5 879 aa4.31□□□□□ -1.72
APP-207ENST00000415997 LIN37Q96GY3 246 aaPredicted RBP4.31□□□□□ -1.72
APP-207ENST00000415997 NIF3L1Q9GZT8 377 aa4.31□□□□□ -1.72
APP-207ENST00000415997 TUT1Q9H6E5 874 aaKnown RBP4.31□□□□□ -1.72
APP-207ENST00000415997 GBA2Q9HCG7 927 aaPredicted RBP4.31□□□□□ -1.72
APP-207ENST00000415997 ABCB6Q9NP58 842 aa4.31□□□□□ -1.72
APP-207ENST00000415997 PICK1Q9NRD5 415 aa4.31□□□□□ -1.72
APP-207ENST00000415997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.31□□□□□ -1.72
APP-207ENST00000415997 CSADQ9Y600 493 aa4.31□□□□□ -1.72
APP-207ENST00000415997 EDC4Q6P2E9 1401 aaKnown RBP4.3□□□□□ -1.72
APP-207ENST00000415997 COL15A1P39059 1388 aa4.3□□□□□ -1.72
APP-207ENST00000415997 ANKRD26Q9UPS8 1709 aa4.3□□□□□ -1.72
APP-207ENST00000415997 CACNA1GO43497 2377 aa4.3□□□□□ -1.72
APP-207ENST00000415997 WTIPA6NIX2 430 aaPredicted RBP4.3□□□□□ -1.72
APP-207ENST00000415997 ERVV-2B6SEH9 535 aa4.3□□□□□ -1.72
APP-207ENST00000415997 NDUFB5O43674 189 aa4.3□□□□□ -1.72
APP-207ENST00000415997 PHKG2P15735 406 aa4.3□□□□□ -1.72
APP-207ENST00000415997 BMP8BP34820 402 aa4.3□□□□□ -1.72
APP-207ENST00000415997 FCGRTP55899 365 aa4.3□□□□□ -1.72
APP-207ENST00000415997 EIF6P56537 245 aaKnown RBP4.3□□□□□ -1.72
APP-207ENST00000415997 ZP2Q05996 745 aa4.3□□□□□ -1.72
APP-207ENST00000415997 FAM109BQ6ICB4 259 aaPredicted RBP4.3□□□□□ -1.72
APP-207ENST00000415997 SLC23A3Q6PIS1 610 aa4.3□□□□□ -1.72
APP-207ENST00000415997 ISL2Q96A47 359 aa4.3□□□□□ -1.72
APP-207ENST00000415997 SHISA4Q96DD7 197 aa4.3□□□□□ -1.72
APP-207ENST00000415997 TRIM17Q9Y577 477 aa4.3□□□□□ -1.72
APP-207ENST00000415997 SSC5DA1L4H1 1573 aa4.3□□□□□ -1.72
APP-207ENST00000415997 COL2A1P02458 1487 aaPredicted RBP4.3□□□□□ -1.72
APP-207ENST00000415997 KDM3BQ7LBC6 1761 aa4.3□□□□□ -1.72
APP-207ENST00000415997 KMT2BQ9UMN6 2715 aaPredicted RBP4.3□□□□□ -1.72
APP-207ENST00000415997 EVC2Q86UK5 1308 aa4.29□□□□□ -1.72
APP-207ENST00000415997 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
APP-207ENST00000415997 EIF1AYO14602 144 aaKnown RBP4.29□□□□□ -1.72
APP-207ENST00000415997 ICMTO60725 284 aa4.29□□□□□ -1.72
APP-207ENST00000415997 NEFMP07197 916 aa4.29□□□□□ -1.72
APP-207ENST00000415997 FBLN1P23142 703 aa4.29□□□□□ -1.72
APP-207ENST00000415997 HNRNPUQ00839 825 aaKnown RBP eCLIP4.29□□□□□ -1.72
APP-207ENST00000415997 PPP2R3AQ06190 1150 aa4.29□□□□□ -1.72
APP-207ENST00000415997 MESP2Q0VG99 397 aa4.29□□□□□ -1.72
APP-207ENST00000415997 KIF4BQ2VIQ3 1234 aa4.29□□□□□ -1.72
APP-207ENST00000415997 MPZL3Q6UWV2 235 aa4.29□□□□□ -1.72
APP-207ENST00000415997 USP48Q86UV5 1035 aa4.29□□□□□ -1.72
APP-207ENST00000415997 CCDC82Q8N4S0 544 aa4.29□□□□□ -1.72
APP-207ENST00000415997 C2orf69Q8N8R5 385 aa4.29□□□□□ -1.72
APP-207ENST00000415997 EPS8L3Q8TE67 593 aaKnown RBP4.29□□□□□ -1.72
APP-207ENST00000415997 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
APP-207ENST00000415997 HEXIM2Q96MH2 286 aaKnown RBP4.29□□□□□ -1.72
APP-207ENST00000415997 GDF15Q99988 308 aa4.29□□□□□ -1.72
APP-207ENST00000415997 CBX8Q9HC52 389 aa4.29□□□□□ -1.72
APP-207ENST00000415997 PPP4R2Q9NY27 417 aa4.29□□□□□ -1.72
APP-207ENST00000415997 FAM53CQ9NYF3 392 aa4.29□□□□□ -1.72
APP-207ENST00000415997 AKAP2Q9Y2D5 859 aa4.29□□□□□ -1.72
APP-207ENST00000415997 USP34Q70CQ2 3546 aa4.29□□□□□ -1.72
APP-207ENST00000415997 CFAP54Q96N23 3096 aa4.28□□□□□ -1.72
APP-207ENST00000415997 CHD6Q8TD26 2715 aa4.28□□□□□ -1.72
APP-207ENST00000415997 CFPP27918 469 aa4.28□□□□□ -1.72
APP-207ENST00000415997 SERPINB4P48594 390 aa4.28□□□□□ -1.72
APP-207ENST00000415997 PTPN12Q05209 780 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms